#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 157
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = AC
S1_SQLEN2 = 2
S1_SQ = UCACAC
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  17
S2_NAME_ID3 = 23
S2_NUM_ID5_ORIG =  17
S2_NUM_ID3_ORIG = 23
S2_NAME2_ID5 =  19
S2_NAME2_ID3 = 21
S2_NUM2_ID5_ORIG =  19
S2_NUM2_ID3_ORIG = 21
S2_SQ2 = GAA
S2_SQLEN2 = 3
S2_SQ = GUGAAGU
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 21
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 0.7206382807570748
H1_P_Y = 9.284881018167084
H1_P_Z = -7.006333659301875
# Orientation:
H1_DX_X = 0.36103417876127564
H1_DX_Y = -0.05854004353413167
H1_DX_Z = -0.9307133742829707
H1_DY_X = -0.923590416964476
H1_DY_Y = -0.1604783045689473
H1_DY_Z = -0.34817733334331535
H1_DZ_X = -0.12897698809306068
H1_DZ_Y = 0.9853018710353183
H1_DZ_Z = -0.1120051761158587
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 19
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -1.3193542200735775
H2_P_Y = -11.709719982962515
H2_P_Z = -11.132395397707123
# Orientation:
H2_DX_X = 0.9611131855470306
H2_DX_Y = -0.06299856305352947
H2_DX_Z = 0.2688728800396749
H2_DY_X = -0.27583783829541697
H2_DY_Y = -0.26563611963794465
H2_DY_Z = 0.9237699599511817
H2_DZ_X = 0.013226168460678922
H2_DZ_Y = -0.9620128029277399
H2_DZ_Z = -0.27268376458997956
#############  END of Description of junction: j1