#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 144
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = GCU
S1_SQLEN2 = 3
S1_SQ = UGCUU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  22
S2_NAME_ID3 = 25
S2_NUM_ID5_ORIG =  22
S2_NUM_ID3_ORIG = 25
S2_NAME2_ID5 =  23
S2_NAME2_ID3 = 24
S2_NUM2_ID5_ORIG =  23
S2_NUM2_ID3_ORIG = 24
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = GACG
S2_SQLEN = 4
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 24
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -17.25485096904746
H1_P_Y = -8.983844848469982
H1_P_Z = -5.411966422456679
# Orientation:
H1_DX_X = -0.09363743689616655
H1_DX_Y = 0.879364050271473
H1_DX_Z = 0.4668521152374332
H1_DY_X = -0.4063194152752132
H1_DY_Y = -0.46183776785600195
H1_DY_Z = 0.7884227349285373
H1_DZ_X = 0.9089205483329792
H1_DZ_Y = -0.11586519439389598
H1_DZ_Z = 0.40054799156423204
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 23
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -28.29241844688981
H2_P_Y = -6.29742054391597
H2_P_Z = -10.258037209190938
# Orientation:
H2_DX_X = 0.11305606109144506
H2_DX_Y = 0.9865370822878257
H2_DX_Z = -0.11816476768272466
H2_DY_X = 0.8513513180476302
H2_DY_Y = -0.15749984299318776
H2_DY_Z = -0.5003945770246538
H2_DZ_X = -0.5122687383679079
H2_DZ_Y = -0.04402709084355205
H2_DZ_Z = -0.857695957179935
#############  END of Description of junction: j1