############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 144 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 13 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 13 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 11 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 11 S1_SQ2 = UCAGU S1_SQLEN2 = 5 S1_SQ = GCUCAGUAC S1_SQLEN = 9 S1_CHAR = F ## Properties of strand 2 S2_NAME_ID5 = 18 S2_NAME_ID3 = 25 S2_NUM_ID5_ORIG = 18 S2_NUM_ID3_ORIG = 25 S2_NAME2_ID5 = 20 S2_NAME2_ID3 = 23 S2_NUM2_ID5_ORIG = 20 S2_NUM2_ID3_ORIG = 23 S2_SQ2 = AACC S2_SQLEN2 = 4 S2_SQ = GGAACCGC S2_SQLEN = 8 S2_CHAR = F ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 23 H1_INSEQ_CHAR = F H1_OUTSEQ_CHAR = F # Position: H1_P_X = 63.21634423851692 H1_P_Y = 136.92011952830197 H1_P_Z = 152.86875064742222 # Orientation: H1_DX_X = -0.2666335761419205 H1_DX_Y = 0.6045948780680135 H1_DX_Z = 0.7505808214227727 H1_DY_X = 0.5768127839860782 H1_DY_Y = 0.7240077456070253 H1_DY_Z = -0.37828533745209825 H1_DZ_X = -0.7721357058859581 H1_DZ_Y = 0.33208104088453183 H1_DZ_Z = -0.5417828291677722 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 20 H2_OUTID2_ORIG = 11 H2_INSEQ_CHAR = F H2_OUTSEQ_CHAR = F # Position: H2_P_X = 83.24665439152895 H2_P_Y = 127.27556565196406 H2_P_Z = 171.80593596979006 # Orientation: H2_DX_X = -0.8743859709966557 H2_DX_Y = -0.47433563160171843 H2_DX_Z = -0.10224911890693988 H2_DY_X = 0.39536464447576236 H2_DY_Y = -0.5742837100917058 H2_DY_Z = -0.7168577391797157 H2_DZ_X = 0.2813111651229008 H2_DZ_Y = -0.667236036883736 H2_DZ_Z = 0.6896811578264987 ############# END of Description of junction: j2