#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS5
FINGERPRINT = 165
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  45
S1_NAME_ID3 = 53
S1_NUM_ID5_ORIG =  45
S1_NUM_ID3_ORIG = 53
S1_NAME2_ID5 =  47
S1_NAME2_ID3 = 51
S1_NUM2_ID5_ORIG =  47
S1_NUM2_ID3_ORIG = 51
S1_SQ2 = GGCGC
S1_SQLEN2 = 5
S1_SQ = CGGGCGCAG
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  65
S2_NAME_ID3 = 75
S2_NUM_ID5_ORIG =  65
S2_NUM_ID3_ORIG = 75
S2_NAME2_ID5 =  67
S2_NAME2_ID3 = 73
S2_NUM2_ID5_ORIG =  67
S2_NUM2_ID3_ORIG = 73
S2_SQ2 = GACGGUA
S2_SQLEN2 = 7
S2_SQ = CUGACGGUACG
S2_SQLEN = 11
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 47
H1_OUTID2_ORIG = 73
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 33.70819420490373
H1_P_Y = -4.280644397641865
H1_P_Z = 5.497584183428099
# Orientation:
H1_DX_X = -0.2898601197323032
H1_DX_Y = -0.9569469685249139
H1_DX_Z = -0.015284319407534497
H1_DY_X = -0.3778058618889162
H1_DY_Y = 0.12908152112026983
H1_DY_Z = -0.9168427845752234
H1_DZ_X = 0.8793428465116122
H1_DZ_Y = -0.2599816538455215
H1_DZ_Z = -0.3989557593926909
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 67
H2_OUTID2_ORIG = 51
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 9.536207900519432
H2_P_Y = 1.6952359752751036
H2_P_Z = 12.062039528676534
# Orientation:
H2_DX_X = 0.32017952865276733
H2_DX_Y = 0.9459392624238525
H2_DX_Z = 0.051807154300426816
H2_DY_X = -0.12024949534042406
H2_DY_Y = 0.09482374118239512
H2_DY_Z = -0.9882046938658746
H2_DZ_X = -0.939694167430055
H2_DZ_Y = 0.3101731289347782
H2_DZ_Z = 0.14410933968603246
#############  END of Description of junction: j1