#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 166
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = GUC
S1_SQLEN2 = 3
S1_SQ = AAGUCCG
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  20
S2_NAME_ID3 = 25
S2_NUM_ID5_ORIG =  20
S2_NUM_ID3_ORIG = 25
S2_NAME2_ID5 =  22
S2_NAME2_ID3 = 23
S2_NUM2_ID5_ORIG =  22
S2_NUM2_ID3_ORIG = 23
S2_SQ2 = GC
S2_SQLEN2 = 2
S2_SQ = CGGCUU
S2_SQLEN = 6
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 23
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 22.887574924450192
H1_P_Y = -0.528456524655458
H1_P_Z = -6.084073667092715
# Orientation:
H1_DX_X = -0.8452523752083039
H1_DX_Y = 0.41757980733018957
H1_DX_Z = 0.3334299427388059
H1_DY_X = -0.003968350377437702
H1_DY_Y = -0.6288594324219416
H1_DY_Z = 0.7775088851255889
H1_DZ_X = 0.534352574991459
H1_DZ_Y = 0.6558680650588462
H1_DZ_Z = 0.5332020319128219
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 22
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 11.079108167024144
H2_P_Y = -14.437530222119399
H2_P_Z = -14.231948487104248
# Orientation:
H2_DX_X = -0.19691247248664645
H2_DX_Y = 0.5465562735019365
H2_DX_Z = -0.8139420852093071
H2_DY_X = 0.9077103754175813
H2_DY_Y = -0.2121179065003318
H2_DY_Z = -0.36203296548959507
H2_DZ_X = -0.37052307962996167
H2_DZ_Y = -0.8101124820897372
H2_DZ_Z = -0.45434613877960395
#############  END of Description of junction: j1