############# Start of Description of junction: j19 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 24:45:63:65:84:102 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1234 S1_NAME_ID3 = 1243 S1_NUM_ID5_ORIG = 1234 S1_NUM_ID3_ORIG = 1243 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = CUACAAUGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 942 S2_NAME_ID3 = 947 S2_NUM_ID5_ORIG = 942 S2_NUM_ID3_ORIG = 947 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = GUGGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1294 S3_NAME_ID3 = 1305 S3_NUM_ID5_ORIG = 1294 S3_NUM_ID3_ORIG = 1305 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GGCCCAGUUCGG S3_SQLEN = 12 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1332 S4_NAME_ID3 = 1341 S4_NUM_ID5_ORIG = 1332 S4_NUM_ID3_ORIG = 1341 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AAGCCGGAAU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 235.8889937457685 H1_P_Y = 115.2842485765896 H1_P_Z = -4.17201025810313 # Orientation: H1_DX_X = 0.9628556596028375 H1_DX_Y = -0.2533864882372967 H1_DX_Z = 0.09329665776186946 H1_DY_X = 0.12196717449899097 H1_DY_Y = 0.7164013868242165 H1_DY_Z = 0.6869447294368691 H1_DZ_X = -0.24090036761180045 H1_DZ_Y = -0.6500494908352294 H1_DZ_Z = 0.720695963877537 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 256.9226841625904 H2_P_Y = 139.17596185776068 H2_P_Z = -9.017850020983484 # Orientation: H2_DX_X = 0.1875306128822558 H2_DX_Y = -0.8599944045475638 H2_DX_Z = 0.4745965585409717 H2_DY_X = 0.9314281050303634 H2_DY_Y = 0.3091077878027022 H2_DY_Z = 0.19207826706654707 H2_DZ_X = -0.31188772722180147 H2_DZ_Y = 0.4060320180313681 H2_DZ_Z = 0.8589901314577499 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 256.0756482893251 H3_P_Y = 116.32984119367585 H3_P_Z = -0.7451919293411686 # Orientation: H3_DX_X = -0.9478637978173481 H3_DX_Y = 0.2794214449338739 H3_DX_Z = -0.15322492257569897 H3_DY_X = -0.2847922791981432 H3_DY_Y = -0.9584892240663265 H3_DY_Z = 0.013847926120494236 H3_DZ_X = -0.14299502962126098 H3_DZ_Y = 0.05676322277477652 H3_DZ_Z = 0.9880943062500807 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 228.3292298424517 H4_P_Y = 123.3469000280229 H4_P_Z = -18.218942249770418 # Orientation: H4_DX_X = -0.5171669583764356 H4_DX_Y = -0.6855755430267294 H4_DX_Z = 0.5123714589702075 H4_DY_X = 0.2669568291508142 H4_DY_Y = 0.4395703988712967 H4_DY_Z = 0.8576199133683176 H4_DZ_X = -0.8131865644078289 H4_DZ_Y = 0.5803137420738267 H4_DZ_Z = -0.04431221306681721 ############# END of Description of junction: j19