#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 10:51:52:82:94:99:99:108:133:143
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 146.006964778878
H1_P_Y = 85.82822641797311
H1_P_Z = 26.84794531262335
# Orientation:
H1_DX_X = -0.08539278179546272
H1_DX_Y = -0.3672008206769988
H1_DX_Z = 0.9262135985351208
H1_DY_X = -0.9108169201759893
H1_DY_Y = 0.4055983747420555
H1_DY_Z = 0.07682770546976414
H1_DZ_X = -0.40388192672907053
H1_DZ_Y = -0.837050485753835
H1_DZ_Z = -0.36908789408607134
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 154.5953460130991
H2_P_Y = 99.8356932450294
H2_P_Z = 49.23120673186632
# Orientation:
H2_DX_X = -0.7081466771389842
H2_DX_Y = 0.2881520588152
H2_DX_Z = -0.644590315361306
H2_DY_X = -0.3345211556205072
H2_DY_Y = 0.6670434290277427
H2_DY_Z = 0.6656941191217101
H2_DZ_X = 0.6217908652427582
H2_DZ_Y = 0.6870381756434512
H2_DZ_Z = -0.3759716280641001
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 136.9588655094674
H3_P_Y = 87.64491335425146
H3_P_Z = 48.36441962045482
# Orientation:
H3_DX_X = 0.8118138554824554
H3_DX_Y = -0.3895190141954714
H3_DX_Z = -0.4350094270552418
H3_DY_X = 0.265691513953044
H3_DY_Y = -0.41698547340882897
H3_DY_Z = 0.8692129396064914
H3_DZ_X = -0.5199675792393919
H3_DZ_Y = -0.8212174209953247
H3_DZ_Z = -0.23502268825310324
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.51895442665102
H4_P_Y = 98.08379004231365
H4_P_Z = 29.42494866320509
# Orientation:
H4_DX_X = -0.2574910988255681
H4_DX_Y = -0.8700712513838056
H4_DX_Z = -0.4203264820838726
H4_DY_X = -0.23620570472951385
H4_DY_Y = 0.4784736937139087
H4_DY_Z = -0.845736241080516
H4_DZ_X = 0.9369659540660109
H4_DZ_Y = -0.11848604111533234
H4_DZ_Z = -0.3287185102515444
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.4436715788062
H5_P_Y = 83.80045635244137
H5_P_Z = 21.15846002294625
# Orientation:
H5_DX_X = -0.16388199098227574
H5_DX_Y = 0.8441129206260598
H5_DX_Z = 0.5105057005203868
H5_DY_X = 0.9821093199909967
H5_DY_Y = 0.18826971328186914
H5_DY_Z = 0.003974751264291143
H5_DZ_X = -0.09275762296726953
H5_DZ_Y = 0.5020237965404419
H5_DZ_Z = -0.8598651819259686
#############  END of Description of junction: j9