############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 3 LILLEY = 3HS19 FINGERPRINT = 35:122:157 LOOP_LENGTH_SUM = 19 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 176 S1_NAME_ID3 = 200 S1_NUM_ID5_ORIG = 176 S1_NUM_ID3_ORIG = 200 S1_NAME2_ID5 = 178 S1_NAME2_ID3 = 198 S1_NUM2_ID5_ORIG = 178 S1_NUM2_ID3_ORIG = 198 S1_SQ2 = CAUGUGGACCCGCGUCCAAAG S1_SQLEN2 = 21 S1_SQ = CCCAUGUGGACCCGCGUCCAAAGGG S1_SQLEN = 25 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 141 S2_NAME_ID3 = 146 S2_NUM_ID5_ORIG = 141 S2_NUM_ID3_ORIG = 146 S2_NAME2_ID5 = 143 S2_NAME2_ID3 = 144 S2_NUM2_ID5_ORIG = 143 S2_NUM2_ID3_ORIG = 144 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = AGAGGG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 217 S3_NAME_ID3 = 222 S3_NUM_ID5_ORIG = 217 S3_NUM_ID3_ORIG = 222 S3_NAME2_ID5 = 219 S3_NAME2_ID3 = 220 S3_NUM2_ID5_ORIG = 219 S3_NUM2_ID3_ORIG = 220 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = CCCGCU S3_SQLEN = 6 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 178 H1_OUTID2_ORIG = 144 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 95.09520599014883 H1_P_Y = 39.121103949427884 H1_P_Z = -2.792309901237388 # Orientation: H1_DX_X = -0.6856569394580987 H1_DX_Y = -0.6119758139887708 H1_DX_Z = -0.3941575376238866 H1_DY_X = 0.6921631647691697 H1_DY_Y = -0.3804866841120358 H1_DY_Z = -0.6133025652564625 H1_DZ_X = 0.22535464208594647 H1_DZ_Y = -0.6933364885149231 H1_DZ_Z = 0.6844704515054771 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 219 H2_OUTID2_ORIG = 198 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 87.16840573181787 H2_P_Y = 47.595539780144804 H2_P_Z = 11.888615984488528 # Orientation: H2_DX_X = 0.9070625264425303 H2_DX_Y = -0.10203047506976048 H2_DX_Z = 0.40844504560678807 H2_DY_X = -0.18904679617254772 H2_DY_Y = 0.7681563012873482 H2_DY_Z = 0.6117166056675636 H2_DZ_X = -0.37616337139677114 H2_DZ_Y = -0.6320804370881774 H2_DZ_Z = 0.6774772609245492 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 143 H3_OUTID2_ORIG = 220 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 94.49456155021862 H3_P_Y = 60.687081442655625 H3_P_Z = -1.3603832542532492 # Orientation: H3_DX_X = 0.36713062369572924 H3_DX_Y = -0.8546878449178479 H3_DX_Z = -0.36704739870276737 H3_DY_X = -0.6051187329688901 H3_DY_Y = 0.08023285514135381 H3_DY_Z = -0.7920820714837493 H3_DZ_X = 0.7064321794446471 H3_DZ_Y = 0.5129048417645805 H3_DZ_Z = -0.4877316876516724 ############# END of Description of junction: j3