############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 19:65:75:99:110:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.62065800519012 H1_P_Y = 77.88527440998757 H1_P_Z = -17.184997260842266 # Orientation: H1_DX_X = 0.30280793945284756 H1_DX_Y = 0.3661617268366655 H1_DX_Z = 0.8799050753372804 H1_DY_X = -0.2019791275514251 H1_DY_Y = 0.9269341606759554 H1_DY_Z = -0.3162238033506348 H1_DZ_X = -0.9314031263839979 H1_DZ_Y = -0.08196738114614277 H1_DZ_Z = 0.3546400493319375 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.57730850784604 H2_P_Y = 61.08939511378139 H2_P_Z = -37.443384040207356 # Orientation: H2_DX_X = -0.1074541004721965 H2_DX_Y = 0.9850471657724427 H2_DX_Z = -0.1346688438184458 H2_DY_X = -0.6169707715881714 H2_DY_Y = -0.1722839306720374 H2_DY_Z = -0.767896682007482 H2_DZ_X = -0.7796157279696274 H2_DZ_Y = 5.730932588434712E-4 H2_DZ_Z = 0.6262579247135278 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.75613782612052 H3_P_Y = 79.43877894396269 H3_P_Z = 1.627786536513696 # Orientation: H3_DX_X = -0.37101859667993153 H3_DX_Y = 0.34770812834695164 H3_DX_Z = -0.8610715756539118 H3_DY_X = -0.8500599164290747 H3_DY_Y = 0.24610218091891056 H3_DY_Z = 0.46565207508134066 H3_DZ_X = 0.3738226041831183 H3_DZ_Y = 0.9047280110775944 H3_DZ_Z = 0.20426425671990245 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.34690334150943 H4_P_Y = 64.46854665584466 H4_P_Z = -0.7228167091650626 # Orientation: H4_DX_X = 0.7237564274466308 H4_DX_Y = -0.2673757612400749 H4_DX_Z = -0.6361500106350662 H4_DY_X = 0.5491593128055285 H4_DY_Y = -0.33505702591351394 H4_DY_Z = 0.7656114148476085 H4_DZ_X = -0.41785246545720156 H4_DZ_Y = -0.9034638851040455 H4_DZ_Z = -0.09566778676260301 ############# END of Description of junction: j4