#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 7:51:54:82:93:97:101:106:135:141
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.41842060551198
H1_P_Y = 85.45104745741986
H1_P_Z = 26.484962389367787
# Orientation:
H1_DX_X = -0.0966830229241964
H1_DX_Y = -0.35582701610125866
H1_DX_Z = 0.9295372653587997
H1_DY_X = -0.8921737833873351
H1_DY_Y = 0.4449863553617206
H1_DY_Z = 0.07754407635793115
H1_DZ_X = -0.44122367719168665
H1_DZ_Y = -0.821811583122539
H1_DZ_Z = -0.3604821611828797
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 154.46509058927498
H2_P_Y = 99.3662977856053
H2_P_Z = 48.794254684646546
# Orientation:
H2_DX_X = -0.7216373899572943
H2_DX_Y = 0.2801802511689573
H2_DX_Z = -0.633039101691601
H2_DY_X = -0.3392417855666281
H2_DY_Y = 0.6539903616355502
H2_DY_Z = 0.6761742510724176
H2_DZ_X = 0.6034521425441994
H2_DZ_Y = 0.70270593689159
H2_DZ_Z = -0.37689504894085246
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 136.3710213491555
H3_P_Y = 87.15980636535642
H3_P_Z = 47.80088338484158
# Orientation:
H3_DX_X = 0.8178518394452681
H3_DX_Y = -0.36361924555895087
H3_DX_Z = -0.4459814042929793
H3_DY_X = 0.26801408726134923
H3_DY_Y = -0.44513044899730403
H3_DY_Z = 0.8544163694621716
H3_DZ_X = -0.5092021383944427
H3_DZ_Y = -0.8183152984238973
H3_DZ_Z = -0.26659567629640435
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.43012390548128
H4_P_Y = 97.51846363192463
H4_P_Z = 29.262931234622236
# Orientation:
H4_DX_X = -0.26821500966465806
H4_DX_Y = -0.8659062372273212
H4_DX_Z = -0.422216883747474
H4_DY_X = -0.20855997121481096
H4_DY_Y = 0.4800742419504047
H4_DY_Z = -0.8520747975516123
H4_DZ_X = 0.9405123321878648
H4_DZ_Y = -0.14048170893954648
H4_DZ_Z = -0.30935649735533133
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.00836231153036
H5_P_Y = 83.31959258461193
H5_P_Z = 21.04818300639584
# Orientation:
H5_DX_X = -0.17339068696355753
H5_DX_Y = 0.8601809311852691
H5_DX_Z = 0.47960862721549447
H5_DY_X = 0.9829674287493333
H5_DY_Y = 0.18127245566482486
H5_DY_Z = 0.030254434966870747
H5_DZ_X = -0.06091554557110612
H5_DZ_Y = 0.47668549636262014
H5_DZ_Z = -0.8769607938016968
#############  END of Description of junction: j9