#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 37:66:74:80:107:109:116:119:125:170
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = CA
S4_SQLEN2 = 2
S4_SQ = CCCACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 114.76388516624313
H1_P_Y = 44.776855951135786
H1_P_Z = 9.360026704503742
# Orientation:
H1_DX_X = -0.1170162802585395
H1_DX_Y = 0.8257429242308874
H1_DX_Z = 0.5517751473535881
H1_DY_X = -0.9348243612620735
H1_DY_Y = 0.09598400951048092
H1_DY_Z = -0.34189250285617234
H1_DZ_X = -0.3352769060723091
H1_DZ_Y = -0.5558198386176159
H1_DZ_Z = 0.7606929099535975
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 130.78884271097223
H2_P_Y = 70.43823458040086
H2_P_Z = -0.28914488137270355
# Orientation:
H2_DX_X = 0.836321033267609
H2_DX_Y = -0.4125846924262788
H2_DX_Z = 0.36102770100050874
H2_DY_X = 0.3639075266146392
H2_DY_Y = -0.0747613497713786
H2_DY_Z = -0.9284298856960358
H2_DZ_X = 0.41004687706092113
H2_DZ_Y = 0.9078461390323156
H2_DZ_Z = 0.08761818565064353
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 133.3394722149745
H3_P_Y = 49.861778130759404
H3_P_Z = -7.070075941584323
# Orientation:
H3_DX_X = 0.5990053516022158
H3_DX_Y = 0.4667269783031145
H3_DX_Z = -0.650660062149159
H3_DY_X = -0.22335659479418268
H3_DY_Y = -0.6829296190374095
H3_DY_Z = -0.695499077643789
H3_DZ_X = -0.7689632112876836
H3_DZ_Y = 0.5619368853932443
H3_DZ_Z = -0.30483194799870716
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 144.502015026394
H4_P_Y = 38.05966126290224
H4_P_Z = -2.346402772395647
# Orientation:
H4_DX_X = 0.42759138721459067
H4_DX_Y = 0.6816058504737867
H4_DX_Z = 0.593783689721957
H4_DY_X = -0.6234288199391642
H4_DY_Y = -0.2533068667424132
H4_DY_Z = 0.7397108473791782
H4_DZ_X = 0.6546007271987833
H4_DZ_Y = -0.6864758523510162
H4_DZ_Z = 0.31662089648313163
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 141.6967748163881
H5_P_Y = 55.78839063851212
H5_P_Z = 11.084276382419931
# Orientation:
H5_DX_X = -0.390514395597819
H5_DX_Y = 0.5650099156606174
H5_DX_Z = 0.726816553221008
H5_DY_X = 0.28787323370448803
H5_DY_Y = -0.6749656961289787
H5_DY_Z = 0.6793749409314795
H5_DZ_X = 0.8744298188805146
H5_DZ_Y = 0.4745367259278339
H5_DZ_Z = 0.10093258937674321
#############  END of Description of junction: j1