############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 62:65:108:120:125:172 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 232 S1_NAME_ID3 = 237 S1_NUM_ID5_ORIG = 232 S1_NUM_ID3_ORIG = 237 S1_NAME2_ID5 = 234 S1_NAME2_ID3 = 235 S1_NUM2_ID5_ORIG = 234 S1_NUM2_ID3_ORIG = 235 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 117 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 117 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 115 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 115 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 279 S3_NAME_ID3 = 286 S3_NUM_ID5_ORIG = 279 S3_NUM_ID3_ORIG = 286 S3_NAME2_ID5 = 281 S3_NAME2_ID3 = 284 S3_NUM2_ID5_ORIG = 281 S3_NUM2_ID3_ORIG = 284 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 304 S4_NAME_ID3 = 309 S4_NUM_ID5_ORIG = 304 S4_NUM_ID3_ORIG = 309 S4_NAME2_ID5 = 306 S4_NAME2_ID3 = 307 S4_NUM2_ID5_ORIG = 306 S4_NUM2_ID3_ORIG = 307 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 234 H1_OUTID2_ORIG = 115 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 93.55984047691791 H1_P_Y = 148.41398040163463 H1_P_Z = 133.77221795177815 # Orientation: H1_DX_X = -0.20971961007731466 H1_DX_Y = -0.4381263147635934 H1_DX_Z = 0.8741069828463139 H1_DY_X = 0.4216669043873651 H1_DY_Y = -0.8471084976146983 H1_DY_Z = -0.3234257488410037 H1_DZ_X = 0.8821647844328169 H1_DZ_Y = 0.3007532636242729 H1_DZ_Z = 0.3623986306899383 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 281 H2_OUTID2_ORIG = 235 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 75.92101101266984 H2_P_Y = 141.4112787362984 H2_P_Z = 125.78096554701078 # Orientation: H2_DX_X = -0.7871774862738334 H2_DX_Y = -0.4527074044869721 H2_DX_Z = 0.4188169182665433 H2_DY_X = -0.6157893385854436 H2_DY_Y = 0.6143724710630067 H2_DY_Z = -0.49330513608154547 H2_DZ_X = -0.03398669722284353 H2_DZ_Y = -0.646221690074384 H2_DZ_Z = -0.762392570588986 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 306 H3_OUTID2_ORIG = 284 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 84.16286588644404 H3_P_Y = 144.58128956979382 H3_P_Z = 152.5316176779251 # Orientation: H3_DX_X = 0.4497718834694382 H3_DX_Y = -0.24587987145119428 H3_DX_Z = -0.8586316682113875 H3_DY_X = 0.8856684808986586 H3_DY_Y = -0.0013333375564172911 H3_DY_Z = 0.46431623292065183 H3_DZ_X = -0.11531086151359204 H3_DZ_Y = -0.9692993918424406 H3_DZ_Z = 0.21716835448765437 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 108 H4_OUTID2_ORIG = 307 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 87.20049369826144 H4_P_Y = 160.87823562548337 H4_P_Z = 150.14511741827815 # Orientation: H4_DX_X = -0.7564241144460198 H4_DX_Y = 0.07726422868230998 H4_DX_Z = -0.649501961544928 H4_DY_X = -0.6300308760128104 H4_DY_Y = 0.1807290585155954 H4_DY_Z = 0.7552470474477673 H4_DZ_X = 0.17573745859968426 H4_DZ_Y = 0.9804933688578501 H4_DZ_Z = -0.08802896836115792 ############# END of Description of junction: j4