#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 9:52:54:82:90:96:99:107:134:142
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.8880549772649
H1_P_Y = 85.72964868140801
H1_P_Z = 26.469818005379846
# Orientation:
H1_DX_X = -0.08367763029042408
H1_DX_Y = -0.37421497099853696
H1_DX_Z = 0.9235589908985418
H1_DY_X = -0.8995031167380034
H1_DY_Y = 0.42720438461539345
H1_DY_Z = 0.09159998222692778
H1_DZ_X = -0.4288265350553502
H1_DZ_Y = -0.8230793213572696
H1_DZ_Z = -0.37235498329750527
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 154.37836367551856
H2_P_Y = 99.52593449223014
H2_P_Z = 48.92360996489838
# Orientation:
H2_DX_X = -0.7146288956855926
H2_DX_Y = 0.29508699723085385
H2_DX_Z = -0.6342154251644274
H2_DY_X = -0.32573692762190376
H2_DY_Y = 0.6619773475173929
H2_DY_Z = 0.6750418100808773
H2_DZ_X = 0.6190323056470106
H2_DZ_Y = 0.6889917673231736
H2_DZ_Z = -0.3769474089660676
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 136.66841536965887
H3_P_Y = 87.27950144856952
H3_P_Z = 48.321148700371815
# Orientation:
H3_DX_X = 0.8090007995990902
H3_DX_Y = -0.3721961681832937
H3_DX_Z = -0.4549590296254209
H3_DY_X = 0.27662849122899047
H3_DY_Y = -0.4418535299391664
H3_DY_Z = 0.8533710423495009
H3_DZ_X = -0.518646685218755
H3_DZ_Y = -0.8162324855517369
H3_DZ_Z = -0.2544997945807097
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.49592539222746
H4_P_Y = 97.81700570643034
H4_P_Z = 29.377302186062437
# Orientation:
H4_DX_X = -0.2743598809587411
H4_DX_Y = -0.870309315563091
H4_DX_Z = -0.409008986410317
H4_DY_X = -0.2394884448710286
H4_DY_Y = 0.4737682235356999
H4_DY_Z = -0.8474602970883467
H4_DZ_X = 0.9313280520276237
H4_DZ_Y = -0.1345561801327193
H4_DZ_Z = -0.3384120179522796
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.24253688345289
H5_P_Y = 83.38410816098518
H5_P_Z = 21.285720295340408
# Orientation:
H5_DX_X = -0.18553910108860805
H5_DX_Y = 0.8606638077409201
H5_DX_Z = 0.47416563773867537
H5_DY_X = 0.9767608086417567
H5_DY_Y = 0.21422916433647288
H5_DY_Z = -0.006647394163852738
H5_DZ_X = -0.10730127990242977
H5_DZ_Y = 0.46191306021002276
H5_DZ_Z = -0.8804105633956887
#############  END of Description of junction: j9