#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 9:52:53:82:92:97:101:108:134:142
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.9801615626877
H1_P_Y = 84.52543598937048
H1_P_Z = 25.595145101243606
# Orientation:
H1_DX_X = -0.06086798690853357
H1_DX_Y = -0.41109276358501745
H1_DX_Z = 0.9095591393074614
H1_DY_X = -0.8950210270680827
H1_DY_Y = 0.4258631120647465
H1_DY_Z = 0.13258194028042425
H1_DZ_X = -0.44185116190374174
H1_DZ_Y = -0.8060045592368397
H1_DZ_Z = -0.3938580978140962
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 155.30757850901318
H2_P_Y = 97.903576825655
H2_P_Z = 48.261658725701
# Orientation:
H2_DX_X = -0.7340288802719783
H2_DX_Y = 0.29565879729133826
H2_DX_Z = -0.6113816144691526
H2_DY_X = -0.3244527165199429
H2_DY_Y = 0.6381961934024218
H2_DY_Z = 0.6981662076250288
H2_DZ_X = 0.5966004003263095
H2_DZ_Y = 0.7108385852715884
H2_DZ_Z = -0.3725271372928134
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 137.51160966749927
H3_P_Y = 85.67639849695357
H3_P_Z = 47.75435306140807
# Orientation:
H3_DX_X = 0.803177920641815
H3_DX_Y = -0.36607768173333
H3_DX_Z = -0.4699918709193085
H3_DY_X = 0.28031646081049644
H3_DY_Y = -0.4638984117154479
H3_DY_Z = 0.8403695290802631
H3_DZ_X = -0.5256690114436537
H3_DZ_Y = -0.8067127088032322
H3_DZ_Z = -0.2699753615854519
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.79064372952186
H4_P_Y = 96.50728500522924
H4_P_Z = 28.072730376514695
# Orientation:
H4_DX_X = -0.2667270289657324
H4_DX_Y = -0.8603857555446552
H4_DX_Z = -0.434273005924819
H4_DY_X = -0.24422665211156414
H4_DY_Y = 0.4962294780871872
H4_DY_Z = -0.8331324309350165
H4_DZ_X = 0.9323143431361984
H4_DZ_Y = -0.11615789569884782
H4_DZ_Z = -0.34248694697656035
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.39271246558758
H5_P_Y = 82.3880049910616
H5_P_Z = 20.01499095672144
# Orientation:
H5_DX_X = -0.16047249929744112
H5_DX_Y = 0.8394861284865556
H5_DX_Z = 0.5191450828505424
H5_DY_X = 0.9816132417477093
H5_DY_Y = 0.1908118228557072
H5_DY_Z = -0.005127561215207521
H5_DZ_X = -0.10336353609841353
H5_DZ_Y = 0.5087768551507992
H5_DZ_Z = -0.8546707500950816
#############  END of Description of junction: j9