############# Start of Description of junction: j21 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS9 FINGERPRINT = 54:85:125 LOOP_LENGTH_SUM = 15 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1343 S1_NAME_ID3 = 1350 S1_NUM_ID5_ORIG = 1343 S1_NUM_ID3_ORIG = 1350 S1_NAME2_ID5 = 1345 S1_NAME2_ID3 = 1348 S1_NUM2_ID5_ORIG = 1345 S1_NUM2_ID3_ORIG = 1348 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUAA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 931 S2_NAME_ID3 = 940 S2_NUM_ID5_ORIG = 931 S2_NUM_ID3_ORIG = 940 S2_NAME2_ID5 = 933 S2_NAME2_ID3 = 938 S2_NUM2_ID5_ORIG = 933 S2_NUM2_ID3_ORIG = 938 S2_SQ2 = GCACAA S2_SQLEN2 = 6 S2_SQ = CCGCACAAGC S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1372 S3_NAME_ID3 = 1386 S3_NUM_ID5_ORIG = 1372 S3_NUM_ID3_ORIG = 1386 S3_NAME2_ID5 = 1374 S3_NAME2_ID3 = 1384 S3_NUM2_ID5_ORIG = 1374 S3_NUM2_ID3_ORIG = 1384 S3_SQ2 = AAUACGUUCCC S3_SQLEN2 = 11 S3_SQ = UGAAUACGUUCCCGG S3_SQLEN = 15 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 1345 H1_OUTID2_ORIG = 938 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 226.80239713248181 H1_P_Y = 123.72508009067437 H1_P_Z = -18.468983774814347 # Orientation: H1_DX_X = 0.568213986717808 H1_DX_Y = 0.8099166685109225 H1_DX_Z = -0.14549177078590603 H1_DY_X = 0.07545040508597367 H1_DY_Y = 0.12478398482521413 H1_DY_Z = 0.9893109690605328 H1_DZ_X = 0.8194144871007722 H1_DZ_Y = -0.5731177428760361 H1_DZ_Z = 0.009795464771023887 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 1374 H2_OUTID2_ORIG = 1348 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 232.31745625868749 H2_P_Y = 140.30224411914006 H2_P_Z = -3.5235156950129642 # Orientation: H2_DX_X = 0.13264724432255548 H2_DX_Y = -0.7322687187117083 H2_DX_Z = -0.6679724786021706 H2_DY_X = 0.949230229192608 H2_DY_Y = 0.2878040996851041 H2_DY_Z = -0.12700697693991003 H2_DZ_X = 0.2852484540897535 H2_DZ_Y = -0.6172125434570717 H2_DZ_Z = 0.7332680244212506 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 15 H3_INID2 = 3 H3_OUTID2 = 13 H3_INID2_ORIG = 933 H3_OUTID2_ORIG = 1384 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 201.69595655059746 H3_P_Y = 126.62433062531585 H3_P_Z = -20.77257582203025 # Orientation: H3_DX_X = 0.20326248509925904 H3_DX_Y = 0.07580751753273773 H3_DX_Z = 0.9761852193291993 H3_DY_X = -0.33112050888740896 H3_DY_Y = 0.9435785435184982 H3_DY_Z = -0.004329065216140293 H3_DZ_X = -0.9214356031461932 H3_DZ_Y = -0.3223550100386774 H3_DZ_Z = 0.21689554342484385 ############# END of Description of junction: j21