#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 8:51:52:81:94:98:100:107:134:141
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 144.94906840425736
H1_P_Y = 85.25321699720047
H1_P_Z = 26.4111689907202
# Orientation:
H1_DX_X = -0.09687901818745104
H1_DX_Y = -0.3724940558703196
H1_DX_Z = 0.9229640481493959
H1_DY_X = -0.8977680026997064
H1_DY_Y = 0.43304349498392014
H1_DY_Z = 0.08053536354119117
H1_DZ_X = -0.4296825213615705
H1_DZ_Y = -0.8208054031214687
H1_DZ_Z = -0.37636607318270876
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 153.8469364171649
H2_P_Y = 98.98158659377816
H2_P_Z = 49.03161300635246
# Orientation:
H2_DX_X = -0.7105247919793101
H2_DX_Y = 0.3026672237878074
H2_DX_Z = -0.6352535490867837
H2_DY_X = -0.3238660486346703
H2_DY_Y = 0.6608086743118093
H2_DY_Z = 0.6770839523249919
H2_DZ_X = 0.624712175745401
H2_DZ_Y = 0.6868219912021232
H2_DZ_Z = -0.3714973080341508
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 136.085812292233
H3_P_Y = 86.91648720786813
H3_P_Z = 47.93725312233264
# Orientation:
H3_DX_X = 0.8103434787964545
H3_DX_Y = -0.36675219417870153
H3_DX_Z = -0.45698607685267234
H3_DY_X = 0.27118448976636955
H3_DY_Y = -0.45661360809232576
H3_DY_Z = 0.8473269648813684
H3_DZ_X = -0.5194250849566799
H3_DZ_Y = -0.8105534164816106
H3_DZ_Z = -0.27055635299829106
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 163.92554045127054
H4_P_Y = 97.26811765665784
H4_P_Z = 29.316167936398614
# Orientation:
H4_DX_X = -0.2635153714493583
H4_DX_Y = -0.8656527819971984
H4_DX_Z = -0.4256817003706139
H4_DY_X = -0.22291041627923391
H4_DY_Y = 0.483978683020041
H4_DY_Z = -0.8462124914561358
H4_DZ_X = 0.9385470661208899
H4_DZ_Y = -0.12810111397907065
H4_DZ_Z = -0.32049884441787313
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 154.39839099282483
H5_P_Y = 83.05059720982189
H5_P_Z = 21.022130433969714
# Orientation:
H5_DX_X = -0.16358439183079554
H5_DX_Y = 0.8449774124945293
H5_DX_Z = 0.5091692440862658
H5_DY_X = 0.9847164332587113
H5_DY_Y = 0.17113029141108882
H5_DY_Z = 0.032372355981639345
H5_DZ_X = -0.059780371524340126
H5_DZ_Y = 0.5066829341270562
H5_DZ_Z = -0.8600573884601026
#############  END of Description of junction: j9