#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:75:77:78:86:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.48255843263378
H1_P_Y = 126.89210026297664
H1_P_Z = 37.046201350655984
# Orientation:
H1_DX_X = -0.19682255570729978
H1_DX_Y = -0.9357602576182273
H1_DX_Z = 0.2925980550638201
H1_DY_X = -0.5786966280379247
H1_DY_Y = -0.13002615363642178
H1_DY_Z = -0.8051108073228548
H1_DZ_X = 0.79143609613309
H1_DZ_Y = -0.3277894745607455
H1_DZ_Z = -0.5159292258680495
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.4221585398733
H2_P_Y = 143.72917832191305
H2_P_Z = 56.06013764073663
# Orientation:
H2_DX_X = -0.6449668831694098
H2_DX_Y = 0.4119517574031306
H2_DX_Z = 0.6436718645297574
H2_DY_X = 0.23685673191693724
H2_DY_Y = -0.6930381508648225
H2_DY_Z = 0.6808795855300005
H2_DZ_X = 0.7265787005963986
H2_DZ_Y = 0.5916027983523691
H2_DZ_Z = 0.3494131091148418
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.279593412957706
H3_P_Y = 171.04198097902776
H3_P_Z = 66.09501471912883
# Orientation:
H3_DX_X = -0.713410368250404
H3_DX_Y = 0.6827540637914353
H3_DX_Z = -0.15777368237161227
H3_DY_X = -0.3422040415184995
H3_DY_Y = -0.14296468209639102
H3_DY_Z = 0.9286858961142173
H3_DZ_X = 0.6115080052143433
H3_DZ_Y = 0.7165249388886252
H3_DZ_Z = 0.3356336864938072
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.589181125336655
H4_P_Y = 141.3866857144273
H4_P_Z = 69.09994843980692
# Orientation:
H4_DX_X = -0.7562231532271184
H4_DX_Y = -0.6437580715048057
H4_DX_Z = -0.11705591781553437
H4_DY_X = 0.6022580689637316
H4_DY_Y = -0.7547582417183207
H4_DY_Z = 0.2600484857220522
H4_DZ_X = -0.25575723037935205
H4_DZ_Y = 0.12615681484030006
H4_DZ_Z = 0.9584741505006917
#############  END of Description of junction: j1