############# Start of Description of junction: j61 # Number of strands: NUM_STRANDS = 4 LILLEY = HS1HS1HS3HS2 FINGERPRINT = 14:15:148:152:162:163 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1778 S1_NAME_ID3 = 1784 S1_NUM_ID5_ORIG = 1778 S1_NUM_ID3_ORIG = 1784 S1_NAME2_ID5 = 1779 S1_NAME2_ID3 = 1783 S1_NUM2_ID5_ORIG = 1779 S1_NUM2_ID3_ORIG = 1783 S1_SQ2 = CACAG S1_SQLEN2 = 5 S1_SQ = UCACAGC S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1763 S2_NAME_ID3 = 1768 S2_NUM_ID5_ORIG = 1763 S2_NUM_ID3_ORIG = 1768 S2_NAME2_ID5 = 1764 S2_NAME2_ID3 = 1767 S2_NUM2_ID5_ORIG = 1764 S2_NUM2_ID3_ORIG = 1767 S2_SQ2 = ACUG S2_SQLEN2 = 4 S2_SQ = GACUGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1818 S3_NAME_ID3 = 1822 S3_NUM_ID5_ORIG = 1818 S3_NUM_ID3_ORIG = 1822 S3_NAME2_ID5 = 1819 S3_NAME2_ID3 = 1821 S3_NUM2_ID5_ORIG = 1819 S3_NUM2_ID3_ORIG = 1821 S3_SQ2 = UGA S3_SQLEN2 = 3 S3_SQ = GUGAC S3_SQLEN = 5 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1958 S4_NAME_ID3 = 1962 S4_NUM_ID5_ORIG = 1958 S4_NUM_ID3_ORIG = 1962 S4_NAME2_ID5 = 1959 S4_NAME2_ID3 = 1961 S4_NUM2_ID5_ORIG = 1959 S4_NUM2_ID3_ORIG = 1961 S4_SQ2 = UAA S4_SQLEN2 = 3 S4_SQ = GUAAC S4_SQLEN = 5 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 1779 H1_OUTID2_ORIG = 1767 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 61.52089919776032 H1_P_Y = 143.28023725517778 H1_P_Z = 137.36929472174137 # Orientation: H1_DX_X = -0.7133924667643754 H1_DX_Y = 0.7007121647993984 H1_DX_Z = 0.008581984967690914 H1_DY_X = -0.08375509843535411 H1_DY_Y = -0.07309915334255379 H1_DY_Z = -0.9938015884806646 H1_DZ_X = -0.6957415266102274 H1_DZ_Y = -0.7096893516763032 H1_DZ_Z = 0.1108366016590594 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 1819 H2_OUTID2_ORIG = 1783 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 67.35389501446524 H2_P_Y = 166.20485827467655 H2_P_Z = 128.4244234407845 # Orientation: H2_DX_X = 0.8877328960140005 H2_DX_Y = -0.08383117422840769 H2_DX_Z = 0.4526617275207627 H2_DY_X = 0.40151577015919315 H2_DY_Y = -0.34001316970974926 H2_DY_Z = -0.850397630957076 H2_DZ_X = 0.22520078074479954 H2_DZ_Y = 0.9366767738400767 H2_DZ_Z = -0.2681813373456521 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 5 H3_INID2 = 2 H3_OUTID2 = 4 H3_INID2_ORIG = 1959 H3_OUTID2_ORIG = 1821 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 78.1248463493905 H3_P_Y = 153.8521617404281 H3_P_Z = 132.93883176891862 # Orientation: H3_DX_X = -0.05624543781804903 H3_DX_Y = 0.49358376778471325 H3_DX_Z = 0.8678775921200383 H3_DY_X = 0.9292705665505281 H3_DY_Y = -0.291981196527189 H3_DY_Z = 0.22628122992725253 H3_DZ_X = 0.3650926798328271 H3_DZ_Y = 0.8192203885731715 H3_DZ_Z = -0.44225025729613776 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 1764 H4_OUTID2_ORIG = 1961 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 75.14779184556683 H4_P_Y = 141.52789313721533 H4_P_Z = 141.54520864204926 # Orientation: H4_DX_X = -0.6347779597717391 H4_DX_Y = 0.47680191477346057 H4_DX_Z = 0.6080434818797187 H4_DY_X = -0.5949025954451912 H4_DY_Y = 0.20060259943360848 H4_DY_Z = -0.7783633464090371 H4_DZ_X = -0.493100236991026 H4_DZ_Y = -0.8558145425083978 H4_DZ_Z = 0.15631258781860424 ############# END of Description of junction: j61