############# Start of Description of junction: j78 # Number of strands: NUM_STRANDS = 6 LILLEY = HS1HS2HS10HS13HS3HS2 FINGERPRINT = 8:31:35:39:42:68:107:138:139:143:146:151:151:167:175 LOOP_LENGTH_SUM = 31 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2221 S1_NAME_ID3 = 2227 S1_NUM_ID5_ORIG = 2221 S1_NUM_ID3_ORIG = 2227 S1_NAME2_ID5 = 2222 S1_NAME2_ID3 = 2226 S1_NUM2_ID5_ORIG = 2222 S1_NUM2_ID3_ORIG = 2226 S1_SQ2 = UUUGA S1_SQLEN2 = 5 S1_SQ = GUUUGAC S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2056 S2_NAME_ID3 = 2061 S2_NUM_ID5_ORIG = 2056 S2_NUM_ID3_ORIG = 2061 S2_NAME2_ID5 = 2057 S2_NAME2_ID3 = 2060 S2_NUM2_ID5_ORIG = 2057 S2_NUM2_ID3_ORIG = 2060 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2235 S3_NAME_ID3 = 2239 S3_NUM_ID5_ORIG = 2235 S3_NUM_ID3_ORIG = 2239 S3_NAME2_ID5 = 2236 S3_NAME2_ID3 = 2238 S3_NUM2_ID5_ORIG = 2236 S3_NUM2_ID3_ORIG = 2238 S3_SQ2 = UCG S3_SQLEN2 = 3 S3_SQ = GUCGC S3_SQLEN = 5 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2259 S4_NAME_ID3 = 2264 S4_NUM_ID5_ORIG = 2259 S4_NUM_ID3_ORIG = 2264 S4_NAME2_ID5 = 2260 S4_NAME2_ID3 = 2263 S4_NUM2_ID5_ORIG = 2260 S4_NUM2_ID3_ORIG = 2263 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2362 S5_NAME_ID3 = 2375 S5_NUM_ID5_ORIG = 2362 S5_NUM_ID3_ORIG = 2375 S5_NAME2_ID5 = 2363 S5_NAME2_ID3 = 2374 S5_NUM2_ID5_ORIG = 2363 S5_NUM2_ID3_ORIG = 2374 S5_SQ2 = GCUUAGUGAACC S5_SQLEN2 = 12 S5_SQ = GGCUUAGUGAACCG S5_SQLEN = 14 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 2399 S6_NAME_ID3 = 2415 S6_NUM_ID5_ORIG = 2399 S6_NUM_ID3_ORIG = 2415 S6_NAME2_ID5 = 2400 S6_NAME2_ID3 = 2414 S6_NUM2_ID5_ORIG = 2400 S6_NUM2_ID3_ORIG = 2414 S6_SQ2 = GAUCAACGGAUAAAA S6_SQLEN2 = 15 S6_SQ = CGAUCAACGGAUAAAAG S6_SQLEN = 17 S6_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2222 H1_OUTID2_ORIG = 2060 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 56.44812535469696 H1_P_Y = 156.96732924595614 H1_P_Z = 100.12159916184137 # Orientation: H1_DX_X = 0.2765212522246685 H1_DX_Y = -0.14950094004748848 H1_DX_Z = -0.9493078878809627 H1_DY_X = -0.9466962480727972 H1_DY_Y = 0.1274678589334428 H1_DY_Z = -0.2958346815770767 H1_DZ_X = 0.16523380693124068 H1_DZ_Y = 0.9805107923239973 H1_DZ_Z = -0.10628440705563946 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 2236 H2_OUTID2_ORIG = 2226 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 63.869557889868176 H2_P_Y = 132.5825020889956 H2_P_Z = 91.73042006784425 # Orientation: H2_DX_X = -0.591041642985175 H2_DX_Y = -0.4846951102021251 H2_DX_Z = -0.6447793625757043 H2_DY_X = 0.7888115261927311 H2_DY_Y = -0.5144286616502143 H2_DY_Z = -0.3363621979626146 H2_DZ_X = -0.16865987194019283 H2_DZ_Y = -0.7074134591728409 H2_DZ_Z = 0.6863818509971082 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 5 H3_INID2 = 2 H3_OUTID2 = 4 H3_INID2_ORIG = 2260 H3_OUTID2_ORIG = 2238 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 70.27719075135158 H3_P_Y = 127.23499176545873 H3_P_Z = 72.77584918786448 # Orientation: H3_DX_X = -0.6130157354538 H3_DX_Y = 0.5795789686349622 H3_DX_Z = -0.5369356825561908 H3_DY_X = 0.6708789658613057 H3_DY_Y = 0.022905667105391103 H3_DY_Z = -0.7412130217281003 H3_DZ_X = -0.417292608670337 H3_DZ_Y = -0.8145941010899094 H3_DZ_Z = -0.40286887347944855 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2363 H4_OUTID2_ORIG = 2263 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 72.03369285980875 H4_P_Y = 147.6303214287215 H4_P_Z = 54.93134395610558 # Orientation: H4_DX_X = 0.9784281380418918 H4_DX_Y = -0.20251797075601985 H4_DX_Z = -0.0408025760062003 H4_DY_X = -0.08817353881481438 H4_DY_Y = -0.23076222155904702 H4_DY_Z = -0.9690068235848486 H4_DZ_X = 0.18682560247663105 H4_DZ_Y = 0.9517012496692416 H4_DZ_Z = -0.24364097692558317 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 2 H5_OUTID2 = 13 H5_INID2_ORIG = 2400 H5_OUTID2_ORIG = 2374 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 54.15477623278519 H5_P_Y = 157.01051831110044 H5_P_Z = 60.9067744884218 # Orientation: H5_DX_X = -0.024579927848485283 H5_DX_Y = 0.5586890819973007 H5_DX_Z = 0.8290128689013088 H5_DY_X = 0.9518989116763521 H5_DY_Y = 0.2664340229472373 H5_DY_Z = -0.15133199716362356 H5_DZ_X = -0.30542476830857623 H5_DZ_Y = 0.785416718101402 H5_DZ_Z = -0.5383644581791103 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 17 H6_INID2 = 2 H6_OUTID2 = 16 H6_INID2_ORIG = 2057 H6_OUTID2_ORIG = 2414 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 53.46340808311804 H6_P_Y = 145.78931750802917 H6_P_Z = 100.13428909036246 # Orientation: H6_DX_X = 0.9818481119979197 H6_DX_Y = -0.14856904537091964 H6_DX_Z = -0.11790472307635014 H6_DY_X = 0.11944908845562452 H6_DY_Y = 0.0014836795429573613 H6_DY_Z = 0.9928392185858428 H6_DZ_X = -0.14733024208645418 H6_DZ_Y = -0.9889009239820723 H6_DZ_Z = 0.01920318500035023 ############# END of Description of junction: j78