############# Start of Description of junction: j61 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS14HS12HS4 FINGERPRINT = 23:51:66:133:141:147 LOOP_LENGTH_SUM = 30 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1722 S1_NAME_ID3 = 1725 S1_NUM_ID5_ORIG = 1722 S1_NUM_ID3_ORIG = 1725 S1_NAME2_ID5 = 1723 S1_NAME2_ID3 = 1724 S1_NUM2_ID5_ORIG = 1723 S1_NUM2_ID3_ORIG = 1724 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GUCC S1_SQLEN = 4 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1683 S2_NAME_ID3 = 1700 S2_NUM_ID5_ORIG = 1683 S2_NUM_ID3_ORIG = 1700 S2_NAME2_ID5 = 1684 S2_NAME2_ID3 = 1699 S2_NUM2_ID5_ORIG = 1684 S2_NUM2_ID3_ORIG = 1699 S2_SQ2 = GAACUUUGCAAUCUCA S2_SQLEN2 = 16 S2_SQ = GGAACUUUGCAAUCUCAC S2_SQLEN = 18 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1741 S3_NAME_ID3 = 1756 S3_NUM_ID5_ORIG = 1741 S3_NUM_ID3_ORIG = 1756 S3_NAME2_ID5 = 1742 S3_NAME2_ID3 = 1755 S3_NUM2_ID5_ORIG = 1742 S3_NUM2_ID3_ORIG = 1755 S3_SQ2 = GCGCAGUGAAUAGG S3_SQLEN2 = 14 S3_SQ = GGCGCAGUGAAUAGGC S3_SQLEN = 16 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1970 S4_NAME_ID3 = 1977 S4_NUM_ID5_ORIG = 1970 S4_NUM_ID3_ORIG = 1977 S4_NAME2_ID5 = 1971 S4_NAME2_ID3 = 1976 S4_NUM2_ID5_ORIG = 1971 S4_NUM2_ID3_ORIG = 1976 S4_SQ2 = CGCUGU S4_SQLEN2 = 6 S4_SQ = GCGCUGUC S4_SQLEN = 8 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 18 H1_INID2 = 2 H1_OUTID2 = 17 H1_INID2_ORIG = 1723 H1_OUTID2_ORIG = 1699 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 67.00168384668527 H1_P_Y = 133.63363340100761 H1_P_Z = 168.18199146376617 # Orientation: H1_DX_X = -0.7481014635135637 H1_DX_Y = 0.6284409223731018 H1_DX_Z = 0.21308732335759828 H1_DY_X = 0.32072381189803423 H1_DY_Y = 0.0613051209355433 H1_DY_Z = 0.945186710988196 H1_DZ_X = 0.5809306643399452 H1_DZ_Y = 0.775437740398246 H1_DZ_Z = -0.24741841886896054 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1742 H2_OUTID2_ORIG = 1724 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 62.65020133896833 H2_P_Y = 131.25479246676264 H2_P_Z = 187.16497695102981 # Orientation: H2_DX_X = -0.9420221056197207 H2_DX_Y = -0.28178620710005475 H2_DX_Z = -0.18218366011237208 H2_DY_X = -0.06451886325654499 H2_DY_Y = -0.3807005789144 H2_DY_Z = 0.9224447872357189 H2_DZ_X = -0.3292896427278933 H2_DZ_Y = 0.8807176634441021 H2_DZ_Z = 0.3404478351961018 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 16 H3_INID2 = 2 H3_OUTID2 = 15 H3_INID2_ORIG = 1971 H3_OUTID2_ORIG = 1755 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 71.03737398442492 H3_P_Y = 128.86395046038203 H3_P_Z = 146.18167765327058 # Orientation: H3_DX_X = -0.1085517482328271 H3_DX_Y = 0.34149844729969914 H3_DX_Z = 0.9335926994399131 H3_DY_X = 0.9685970560945947 H3_DY_Y = -0.17498920130464057 H3_DY_Z = 0.17663103450885842 H3_DZ_X = 0.22368786484852876 H3_DZ_Y = 0.9234487478570088 H3_DZ_Z = -0.311779006991884 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 1684 H4_OUTID2_ORIG = 1976 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 61.191500721026216 H4_P_Y = 108.29931160628782 H4_P_Z = 152.29972302891684 # Orientation: H4_DX_X = 0.18271332291545406 H4_DX_Y = 0.25422503368943694 H4_DX_Z = -0.9497291581681395 H4_DY_X = 0.8667804272094983 H4_DY_Y = -0.49755892946689073 H4_DY_Z = 0.033567882183177744 H4_DZ_X = -0.46401242724275704 H4_DZ_Y = -0.8293399447472325 H4_DZ_Z = -0.31126792865782704 ############# END of Description of junction: j61