############# Start of Description of junction: j52 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 14:24:150:155:168:174 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 97.27719150967108 H1_P_Y = 140.55753462289942 H1_P_Z = 92.06115665218213 # Orientation: H1_DX_X = -0.04815583378815802 H1_DX_Y = 0.23154412733353524 H1_DX_Z = -0.9716317886779535 H1_DY_X = -0.3963774560342159 H1_DY_Y = -0.8973157232231586 H1_DY_Z = -0.1941890965125168 H1_DZ_X = -0.916823826053843 H1_DZ_Y = 0.37578159874303196 H1_DZ_Z = 0.13498985897516036 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 111.12314550680357 H2_P_Y = 131.02006465553077 H2_P_Z = 78.45541601715176 # Orientation: H2_DX_X = 0.6653121357295646 H2_DX_Y = 0.5633985792140379 H2_DX_Z = 0.4898385478813907 H2_DY_X = 0.18358891620752615 H2_DY_Y = -0.7594421449050799 H2_DY_Z = 0.6241335901773937 H2_DZ_X = 0.7236400154059481 H2_DZ_Y = -0.3253147237392682 H2_DZ_Z = -0.6086998099406031 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.68610740159335 H3_P_Y = 130.13453325627563 H3_P_Z = 93.82910525300932 # Orientation: H3_DX_X = 0.5204735186632519 H3_DX_Y = 0.8375670282000556 H3_DX_Z = -0.16609873462013525 H3_DY_X = 0.4940179314789219 H3_DY_Y = -0.13671126313718673 H3_DY_Z = 0.8586363106162622 H3_DZ_X = 0.6964578951721165 H3_DZ_Y = -0.528953215136795 H3_DZ_Z = -0.4849277229122606 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.44894371268694 H4_P_Y = 140.65481867034032 H4_P_Z = 104.46120807200262 # Orientation: H4_DX_X = -0.3361042658809623 H4_DX_Y = 0.47478907646765833 H4_DX_Z = -0.813393665652498 H4_DY_X = -0.5183997538850633 H4_DY_Y = -0.8142996456039953 H4_DY_Z = -0.26110875577262505 H4_DZ_X = -0.7863177586882699 H4_DZ_Y = 0.3339033094118804 H4_DZ_Z = 0.5198201249809955 ############# END of Description of junction: j52