#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS6
FINGERPRINT = 49
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  546
S1_NAME_ID3 = 557
S1_NUM_ID5_ORIG =  546
S1_NUM_ID3_ORIG = 557
S1_NAME2_ID5 =  548
S1_NAME2_ID3 = 555
S1_NUM2_ID5_ORIG =  548
S1_NUM2_ID3_ORIG = 555
S1_SQ2 = UACAAGGU
S1_SQLEN2 = 8
S1_SQ = CAUACAAGGUCC
S1_SQLEN = 12
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  600
S2_NAME_ID3 = 610
S2_NUM_ID5_ORIG =  600
S2_NUM_ID3_ORIG = 610
S2_NAME2_ID5 =  602
S2_NAME2_ID3 = 608
S2_NUM2_ID5_ORIG =  602
S2_NUM2_ID3_ORIG = 608
S2_SQ2 = AAGCCGA
S2_SQLEN2 = 7
S2_SQ = GGAAGCCGAUG
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 548
H1_OUTID2_ORIG = 608
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 10.507768565764255
H1_P_Y = 126.44403403545371
H1_P_Z = 94.64069206188222
# Orientation:
H1_DX_X = 0.5399306222265707
H1_DX_Y = 0.5658045592918484
H1_DX_Z = -0.6231694182696828
H1_DY_X = -0.013759388236380232
H1_DY_Y = 0.7461957464426092
H1_DY_Z = 0.6655843952695335
H1_DZ_X = 0.8415970546629659
H1_DZ_Y = -0.3507949667191639
H1_DZ_Z = 0.4106790582767985
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 602
H2_OUTID2_ORIG = 555
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -10.420847486933223
H2_P_Y = 116.26992649907235
H2_P_Z = 92.38067663537221
# Orientation:
H2_DX_X = 0.6923811217677702
H2_DX_Y = 0.49109227997507787
H2_DX_Z = 0.5286177775751355
H2_DY_X = -0.6984805931853941
H2_DY_Y = 0.27248928650249127
H2_DY_Z = 0.661720824581451
H2_DZ_X = 0.18092330740672047
H2_DZ_Y = -0.8273922656698147
H2_DZ_Z = 0.5316848648840562
#############  END of Description of junction: j5