############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 12:25:149:152:169:174 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 96.74845605489314 H1_P_Y = 139.9381531310799 H1_P_Z = 92.31448413422811 # Orientation: H1_DX_X = -0.018716014162436068 H1_DX_Y = 0.26003235114180256 H1_DX_Z = -0.9654185036415868 H1_DY_X = -0.35811294372571467 H1_DY_Y = -0.9032684236642012 H1_DY_Z = -0.23634989813258755 H1_DZ_X = -0.9334906696641241 H1_DZ_Y = 0.34130533422560916 H1_DZ_Z = 0.11002653534109186 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.91052244644897 H2_P_Y = 130.90645508647822 H2_P_Z = 78.6024486512676 # Orientation: H2_DX_X = 0.6672522042993734 H2_DX_Y = 0.5577563890641102 H2_DX_Z = 0.493641880633902 H2_DY_X = 0.17092241357589444 H2_DY_Y = -0.7597311076074789 H2_DY_Z = 0.62737084142546 H2_DZ_X = 0.7249551878530127 H2_DZ_Y = -0.3342401151741967 H2_DZ_Z = -0.6022653244321248 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.56779830306711 H3_P_Y = 130.0987811317812 H3_P_Z = 93.96650583723994 # Orientation: H3_DX_X = 0.506794439713218 H3_DX_Y = 0.8472325279318227 H3_DX_Z = -0.15923705438758873 H3_DY_X = 0.5075619277615289 H3_DY_Y = -0.1439472151433563 H3_DY_Z = 0.8495057908804853 H3_DZ_X = 0.6968072081736665 H3_DZ_Y = -0.5113474776184432 H3_DZ_Z = -0.5029746233862085 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.07954032577412 H4_P_Y = 140.4499276942364 H4_P_Z = 104.59496054416151 # Orientation: H4_DX_X = -0.32628525940175734 H4_DX_Y = 0.4808384854523524 H4_DX_Z = -0.8138379939551896 H4_DY_X = -0.529465757328424 H4_DY_Y = -0.8061918912041222 H4_DY_Z = -0.2640466746114498 H4_DZ_X = -0.7830733945894082 H4_DZ_Y = 0.3447448120923582 H4_DZ_Z = 0.5176360432018186 ############# END of Description of junction: j55