############# Start of Description of junction: j44 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 18:27:27:45:112:128:131:149:156:171 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 71.52803257839895 H1_P_Y = 113.44356994913328 H1_P_Z = 83.64540056354437 # Orientation: H1_DX_X = -0.39999515311659195 H1_DX_Y = -0.8774701003862759 H1_DX_Z = 0.2646697950491017 H1_DY_X = -0.6601778623088137 H1_DY_Y = 0.07553509949049442 H1_DY_Z = -0.7473015715642077 H1_DZ_X = 0.6357429257181053 H1_DZ_Y = -0.47364614605531585 H1_DZ_Z = -0.6095000087992872 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 63.78359157368568 H2_P_Y = 109.06532271823889 H2_P_Z = 115.81275451372586 # Orientation: H2_DX_X = -0.5770161926982951 H2_DX_Y = -0.8116568886593996 H2_DX_Z = -0.0909142918121546 H2_DY_X = 0.8146941748500751 H2_DY_Y = -0.5798587626505878 H2_DY_Z = 0.006100560850669012 H2_DZ_X = -0.05766901099657673 H2_DZ_Y = -0.07054722155460524 H2_DZ_Z = 0.995840034695135 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 64.97588436841235 H3_P_Y = 130.73878380035168 H3_P_Z = 114.39868444927754 # Orientation: H3_DX_X = 0.7396263463194117 H3_DX_Y = 0.5330124867796258 H3_DX_Z = 0.410914293700273 H3_DY_X = -0.45231537329986793 H3_DY_Y = 0.8457833124291199 H3_DY_Z = -0.28295121751463626 H3_DZ_X = -0.4983609845350827 H3_DZ_Y = 0.023415323047686343 H3_DZ_Z = 0.8666533630811131 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 91.4287919117339 H4_P_Y = 119.79253960552467 H4_P_Z = 94.81184848965711 # Orientation: H4_DX_X = 0.7160118810077165 H4_DX_Y = 0.6936033449665047 H4_DX_Z = -0.0790024436776946 H4_DY_X = 0.3183044351294768 H4_DY_Y = -0.22365893063329167 H4_DY_Z = 0.9212268826542527 H4_DZ_X = 0.6212964452116978 H4_DZ_Y = -0.6847562212928295 H4_DZ_Z = -0.3809194725504028 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 48.54684501569698 H5_P_Y = 141.08495558410462 H5_P_Z = 107.89205150170343 # Orientation: H5_DX_X = -0.7345707228443032 H5_DX_Y = -0.67098314952338 H5_DX_Z = -0.10093297873189044 H5_DY_X = 0.43496106617165253 H5_DY_Y = -0.5798140022931477 H5_DY_Z = 0.6889300353879264 H5_DZ_X = -0.5207827993077458 H5_DZ_Y = 0.46216591804295604 H5_DZ_Z = 0.7177659368796299 ############# END of Description of junction: j44