############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 60:127:173 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.78541052662793 H1_P_Y = 155.90127978613407 H1_P_Z = 42.782373472194976 # Orientation: H1_DX_X = 0.21776499675659977 H1_DX_Y = 0.8311363697190188 H1_DX_Z = -0.511654904323116 H1_DY_X = -0.7064337690335378 H1_DY_Y = -0.2275013602857996 H1_DY_Z = -0.670219711018099 H1_DZ_X = -0.6734461642601133 H1_DZ_Y = 0.5074006957015342 H1_DZ_Z = 0.5376009652566935 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.648735678083106 H2_P_Y = 152.7902420186821 H2_P_Z = 21.347858024244058 # Orientation: H2_DX_X = 0.4149291888866742 H2_DX_Y = 0.7863337042356022 H2_DX_Z = -0.45772598112078455 H2_DY_X = 0.20140529294382503 H2_DY_Y = -0.5699757571686064 H2_DY_Z = -0.796594968735242 H2_DZ_X = -0.8872821852060682 H2_DZ_Y = 0.23834206893289434 H2_DZ_Z = -0.3948713486602138 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.08561385556347 H3_P_Y = 148.57835874765914 H3_P_Z = 32.066266713037756 # Orientation: H3_DX_X = 0.646074706111861 H3_DX_Y = 0.42384661371769994 H3_DX_Z = 0.6347767498597605 H3_DY_X = -0.09509070169980305 H3_DY_Y = -0.7804745530834225 H3_DY_Z = 0.6179136108223204 H3_DZ_X = 0.757327691671648 H3_DZ_Y = -0.45957972108143963 H3_DZ_Z = -0.46394099559965696 ############# END of Description of junction: j1