############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 13:25:149:153:169:174 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 97.19736494664846 H1_P_Y = 140.73436932933038 H1_P_Z = 92.22376168471958 # Orientation: H1_DX_X = -0.0367359487244272 H1_DX_Y = 0.2385091378865809 H1_DX_Z = -0.9704451871259465 H1_DY_X = -0.3829218531549827 H1_DY_Y = -0.9003395841901636 H1_DY_Z = -0.20678367323525038 H1_DZ_X = -0.9230500118886624 H1_DZ_Y = 0.36400827502257016 H1_DZ_Z = 0.12440518987330051 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 111.1441276355915 H2_P_Y = 131.1631048831756 H2_P_Z = 78.27923232514085 # Orientation: H2_DX_X = 0.6597748190418145 H2_DX_Y = 0.5731392551788588 H2_DX_Z = 0.4860129446129662 H2_DY_X = 0.19567983399599598 H2_DY_Y = -0.7554778045635828 H2_DY_Z = 0.6252700931430439 H2_DZ_X = 0.7255388278552886 H2_DZ_Y = -0.3174345302339532 H2_DZ_Z = -0.6105970261060207 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.66827466758386 H3_P_Y = 130.35463571932434 H3_P_Z = 93.74715703894833 # Orientation: H3_DX_X = 0.508709883215559 H3_DX_Y = 0.8443027437068338 H3_DX_Z = -0.16842544845701468 H3_DY_X = 0.5067128660972031 H3_DY_Y = -0.13546257874804724 H3_DY_Z = 0.8514058733004362 H3_DZ_X = 0.6960289692608939 H3_DZ_Y = -0.5184619240870632 H3_DZ_Z = -0.4967302157323985 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.38568503421843 H4_P_Y = 140.87924061339646 H4_P_Z = 104.3481338951369 # Orientation: H4_DX_X = -0.3441081009439557 H4_DX_Y = 0.46829679316479655 H4_DX_Z = -0.8138106219362555 H4_DY_X = -0.5249952701474001 H4_DY_Y = -0.8145551343965565 H4_DY_Z = -0.24673852425407006 H4_DZ_X = -0.7784404801830362 H4_DZ_Y = 0.3423420023014785 H4_DZ_Z = 0.5261486218480655 ############# END of Description of junction: j53