############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 9:74:77:80:87:138 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 446 S1_NAME_ID3 = 467 S1_NUM_ID5_ORIG = 446 S1_NUM_ID3_ORIG = 467 S1_NAME2_ID5 = 448 S1_NAME2_ID3 = 465 S1_NUM2_ID5_ORIG = 448 S1_NUM2_ID3_ORIG = 465 S1_SQ2 = GACCGAUAGUGAACAAGU S1_SQLEN2 = 18 S1_SQ = GAGACCGAUAGUGAACAAGUAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 25 S2_NAME_ID3 = 36 S2_NUM_ID5_ORIG = 25 S2_NUM_ID3_ORIG = 36 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 34 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 34 S2_SQ2 = UGCUCGGC S2_SQLEN2 = 8 S2_SQ = AUUGCUCGGCUC S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 474 S3_NAME_ID3 = 491 S3_NUM_ID5_ORIG = 474 S3_NUM_ID3_ORIG = 491 S3_NAME2_ID5 = 476 S3_NAME2_ID3 = 489 S3_NUM2_ID5_ORIG = 476 S3_NUM2_ID3_ORIG = 489 S3_SQ2 = AACGCUGCAAAGUA S3_SQLEN2 = 14 S3_SQ = CGAACGCUGCAAAGUACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 501 S4_NAME_ID3 = 518 S4_NUM_ID5_ORIG = 501 S4_NUM_ID3_ORIG = 518 S4_NAME2_ID5 = 503 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 503 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = GGCGAAAUAGAGCA S4_SQLEN2 = 14 S4_SQ = GAGGCGAAAUAGAGCAUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 448 H1_OUTID2_ORIG = 34 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 45.65983565302872 H1_P_Y = 127.26888070033661 H1_P_Z = 37.31077710381326 # Orientation: H1_DX_X = -0.19355807874141817 H1_DX_Y = -0.9317548657440966 H1_DX_Z = 0.3071939783201145 H1_DY_X = -0.5897608262738174 H1_DY_Y = -0.13972425939994082 H1_DY_Z = -0.7953988302279456 H1_DZ_X = 0.7840391813849266 H1_DZ_Y = -0.33512684389251035 H1_DZ_Z = -0.5224677603028738 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 476 H2_OUTID2_ORIG = 465 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 63.65572493724716 H2_P_Y = 144.42472852814646 H2_P_Z = 56.27015721825814 # Orientation: H2_DX_X = -0.6521806213118779 H2_DX_Y = 0.40263238406703294 H2_DX_Z = 0.6422986847921806 H2_DY_X = 0.24749432168986374 H2_DY_Y = -0.6877683942901456 H2_DY_Z = 0.6824376869332696 H2_DZ_X = 0.716524247961317 H2_DZ_Y = 0.6040379119856993 H2_DZ_Z = 0.34889998992177595 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 503 H3_OUTID2_ORIG = 489 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 25.676038592594587 H3_P_Y = 171.65009093767293 H3_P_Z = 66.19556163651542 # Orientation: H3_DX_X = -0.7174388054832086 H3_DX_Y = 0.6835417031512634 H3_DX_Z = -0.13435884950347088 H3_DY_X = -0.3408119828530154 H3_DY_Y = -0.17619246470570715 H3_DY_Z = 0.9234735555091476 H3_DZ_X = 0.607559670098837 H3_DZ_Y = 0.7083268704729448 H3_DZ_Z = 0.35936651462731106 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 27.827951895891005 H4_P_Y = 142.005722397384 H4_P_Z = 69.32224966766145 # Orientation: H4_DX_X = -0.7570518327522215 H4_DX_Y = -0.6435582826806581 H4_DX_Z = -0.1127176087380235 H4_DY_X = 0.6018262010647675 H4_DY_Y = -0.7540425925152192 H4_DY_Z = 0.26310642786691574 H4_DZ_X = -0.25431819879521456 H4_DZ_Y = 0.1313487931656141 H4_DZ_Z = 0.9581595630663458 ############# END of Description of junction: j1