#############  Start of Description of junction: j40
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 19:26:26:46:110:128:132:151:156:173
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = 0
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 71.39331586161555
H1_P_Y = 113.46919878860399
H1_P_Z = 83.26153334511021
# Orientation:
H1_DX_X = -0.39431829372865934
H1_DX_Y = -0.8813583219320122
H1_DX_Z = 0.26023180357536546
H1_DY_X = -0.67053905086658
H1_DY_Y = 0.08230279963390785
H1_DY_Z = -0.7372948056478918
H1_DZ_X = 0.6284031066869886
H1_DZ_Y = -0.46522441631282163
H1_DZ_Z = -0.6234386721823881
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.53760940349841
H2_P_Y = 109.00049194300318
H2_P_Z = 115.82871385316615
# Orientation:
H2_DX_X = -0.5624143172556018
H2_DX_Y = -0.8172562096956284
H2_DX_Z = -0.12562811572196608
H2_DY_X = 0.8234057982268723
H2_DY_Y = -0.5674300787387381
H2_DY_Z = 0.0050987438564789045
H2_DZ_X = -0.07545215167427699
H2_DZ_Y = -0.10057531236087414
H2_DZ_Z = 0.9920643020244313
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 64.94472051989672
H3_P_Y = 131.298136134685
H3_P_Z = 114.53367639895558
# Orientation:
H3_DX_X = 0.7552247488384722
H3_DX_Y = 0.5340194890569308
H3_DX_Z = 0.3800773132524995
H3_DY_X = -0.44590335568166495
H3_DY_Y = 0.8435815013826016
H3_DY_Z = -0.2992330996345345
H3_DZ_X = -0.4804224975307676
H3_DZ_Y = 0.0565104931178837
H3_DZ_Z = 0.8752147096763565
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 91.4221689445738
H4_P_Y = 119.74425130788485
H4_P_Z = 94.76592473250412
# Orientation:
H4_DX_X = 0.6983601321120716
H4_DX_Y = 0.7070424807506157
H4_DX_Z = -0.11128367486024615
H4_DY_X = 0.3366071456911328
H4_DY_Y = -0.18722416343086934
H4_DY_Z = 0.9228449176851399
H4_DZ_X = 0.6316555670189672
H4_DZ_Y = -0.6819369787902758
H4_DZ_Z = -0.3687454428360013
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = 0
H5_OUTSEQ_CHAR = 0
# Position:
H5_P_X = 48.517686509434974
H5_P_Y = 141.22266950087123
H5_P_Z = 107.63129676679478
# Orientation:
H5_DX_X = -0.7363103966109819
H5_DX_Y = -0.6674232955557784
H5_DX_Z = -0.1113245004123371
H5_DY_X = 0.41858236079406197
H5_DY_Y = -0.5785518563639584
H5_DY_Z = 0.7000475389070715
H5_DZ_X = -0.5316350318354282
H5_DZ_Y = 0.4688538088223879
H5_DZ_Z = 0.70536536552207
#############  END of Description of junction: j40