############# Start of Description of junction: j44 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 18:25:27:44:112:129:132:150:156:172 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 71.86952558117834 H1_P_Y = 113.5029946572258 H1_P_Z = 83.27572437315006 # Orientation: H1_DX_X = -0.4016647105203077 H1_DX_Y = -0.8702299049161581 H1_DX_Z = 0.28524616195886665 H1_DY_X = -0.6797758827173226 H1_DY_Y = 0.07460315379748295 H1_DY_Z = -0.7296157336018325 H1_DZ_X = 0.6136531671868966 H1_DZ_Y = -0.48696435396556126 H1_DZ_Z = -0.6215267559553581 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 64.11487376252633 H2_P_Y = 109.41753273622176 H2_P_Z = 115.54980222662304 # Orientation: H2_DX_X = -0.5816705802088364 H2_DX_Y = -0.8085141254043151 H2_DX_Z = -0.08924261953350765 H2_DY_X = 0.8107506957968837 H2_DY_Y = -0.5851470584085234 H2_DY_Z = 0.01691831258511911 H2_DZ_X = -0.06589875100777931 H2_DZ_Y = -0.06251263118399208 H2_DZ_Z = 0.9958662187051317 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 65.03492460804533 H3_P_Y = 131.07220398417414 H3_P_Z = 114.39867409317098 # Orientation: H3_DX_X = 0.7318067481725166 H3_DX_Y = 0.5509265384811783 H3_DX_Z = 0.40117182419294295 H3_DY_X = -0.46081379383835497 H3_DY_Y = 0.8336960281555719 H3_DY_Z = -0.3043050772595137 H3_DZ_X = -0.5021050992944112 H3_DZ_Y = 0.037826998754269425 H3_DZ_Z = 0.8639789276526244 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 91.34639424627215 H4_P_Y = 120.08231136069267 H4_P_Z = 94.82223699928512 # Orientation: H4_DX_X = 0.7197654555287301 H4_DX_Y = 0.6891682171833082 H4_DX_Z = -0.08357545962728352 H4_DY_X = 0.32121479733665126 H4_DY_Y = -0.2238879853902347 H4_DY_Z = 0.920160433821124 H4_DZ_X = 0.6154337844151172 H4_DZ_Y = -0.6891453681352573 H4_DZ_Z = -0.3825178670052054 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 48.715301775326935 H5_P_Y = 141.36908947376577 H5_P_Z = 107.88954954434047 # Orientation: H5_DX_X = -0.7377481234518015 H5_DX_Y = -0.6648907552363426 H5_DX_Z = -0.11682461189576543 H5_DY_X = 0.42701127057628696 H5_DY_Y = -0.5936484042589143 H5_DY_Z = 0.6820871989135071 H5_DZ_X = -0.5228662172527478 H5_DZ_Y = 0.4533231250687493 H5_DZ_Z = 0.721878842420054 ############# END of Description of junction: j44