#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS3HS1
FINGERPRINT = 14:38:152:154:163:168
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1080
S1_NAME_ID3 = 1083
S1_NUM_ID5_ORIG =  1080
S1_NUM_ID3_ORIG = 1083
S1_NAME2_ID5 =  1081
S1_NAME2_ID3 = 1082
S1_NUM2_ID5_ORIG =  1081
S1_NUM2_ID3_ORIG = 1082
S1_SQ2 = UU
S1_SQLEN2 = 2
S1_SQ = AUUU
S1_SQLEN = 4
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  1055
S2_NAME_ID3 = 1058
S2_NUM_ID5_ORIG =  1055
S2_NUM_ID3_ORIG = 1058
S2_NAME2_ID5 =  1056
S2_NAME2_ID3 = 1057
S2_NUM2_ID5_ORIG =  1056
S2_NUM2_ID3_ORIG = 1057
S2_SQ2 = GA
S2_SQLEN2 = 2
S2_SQ = GGAU
S2_SQLEN = 4
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  1085
S3_NAME_ID3 = 1091
S3_NUM_ID5_ORIG =  1085
S3_NUM_ID3_ORIG = 1091
S3_NAME2_ID5 =  1086
S3_NAME2_ID3 = 1090
S3_NUM2_ID5_ORIG =  1086
S3_NUM2_ID3_ORIG = 1090
S3_SQ2 = AGAGU
S3_SQLEN2 = 5
S3_SQ = AAGAGUG
S3_SQLEN = 7
S3_CHAR = C
## Properties of strand 4
S4_NAME_ID5 =  1100
S4_NAME_ID3 = 1104
S4_NUM_ID5_ORIG =  1100
S4_NUM_ID3_ORIG = 1104
S4_NAME2_ID5 =  1101
S4_NAME2_ID3 = 1103
S4_NUM2_ID5_ORIG =  1101
S4_NUM2_ID3_ORIG = 1103
S4_SQ2 = UCA
S4_SQLEN2 = 3
S4_SQ = CUCAC
S4_SQLEN = 5
S4_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 1081
H1_OUTID2_ORIG = 1057
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 2.8449698853542564
H1_P_Y = 6.1663849163158115
H1_P_Z = 0.8729086093422649
# Orientation:
H1_DX_X = -0.8262603688574037
H1_DX_Y = -0.5451241472241222
H1_DX_Z = 0.14189244859681827
H1_DY_X = -0.5238323734484913
H1_DY_Y = 0.8362238712586452
H1_DY_Z = 0.16226300152691842
H1_DZ_X = -0.2071073330013875
H1_DZ_Y = 0.059743629370651696
H1_DZ_Z = -0.9764923201780312
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 1086
H2_OUTID2_ORIG = 1082
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 3.622553893766671
H2_P_Y = 7.0576512262708855
H2_P_Z = 16.76214984062019
# Orientation:
H2_DX_X = -0.6625405083133251
H2_DX_Y = -0.6591964670247732
H2_DX_Z = -0.35566851520197673
H2_DY_X = 0.7401005298949248
H2_DY_Y = -0.6492209676781195
H2_DY_Z = -0.17539481399498769
H2_DZ_X = -0.1152878158921018
H2_DZ_Y = -0.379436625787684
H2_DZ_Z = 0.9180068444830276
## Properties of helix 3
H3_INID = 1
H3_OUTID = 7
H3_INID2 = 2
H3_OUTID2 = 6
H3_INID2_ORIG = 1101
H3_OUTID2_ORIG = 1090
H3_INSEQ_CHAR = C
H3_OUTSEQ_CHAR = C
# Position:
H3_P_X = 8.173825263549466
H3_P_Y = -1.6230201169643252
H3_P_Z = -8.71278904406611
# Orientation:
H3_DX_X = 0.9906543183892342
H3_DX_Y = 0.13630556859652776
H3_DX_Z = 0.004981307693563863
H3_DY_X = 0.1338223306551516
H3_DY_Y = -0.9642473384590775
H3_DY_Z = -0.2287327132104373
H3_DZ_X = -0.026374329845209488
H3_DZ_Y = 0.2272616603040678
H3_DZ_Z = -0.973476518710676
## Properties of helix 4
H4_INID = 1
H4_OUTID = 5
H4_INID2 = 2
H4_OUTID2 = 4
H4_INID2_ORIG = 1056
H4_OUTID2_ORIG = 1103
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = C
# Position:
H4_P_X = 14.024030097521631
H4_P_Y = -8.121539787515461
H4_P_Z = 6.52710854002256
# Orientation:
H4_DX_X = -0.0636261298702614
H4_DX_Y = 0.9863851178506557
H4_DX_Z = 0.15164469948032888
H4_DY_X = -0.8750536202595018
H4_DY_Y = -0.12820029231863828
H4_DY_Z = 0.46673959197838943
H4_DZ_X = 0.479825882241121
H4_DZ_Y = -0.1030004093786161
H4_DZ_Z = 0.8712967567937842
#############  END of Description of junction: j1