############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS3HS1 FINGERPRINT = 15:41:147:152:159:166 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1080 S1_NAME_ID3 = 1083 S1_NUM_ID5_ORIG = 1080 S1_NUM_ID3_ORIG = 1083 S1_NAME2_ID5 = 1081 S1_NAME2_ID3 = 1082 S1_NUM2_ID5_ORIG = 1081 S1_NUM2_ID3_ORIG = 1082 S1_SQ2 = UU S1_SQLEN2 = 2 S1_SQ = AUUU S1_SQLEN = 4 S1_CHAR = D ## Properties of strand 2 S2_NAME_ID5 = 1055 S2_NAME_ID3 = 1058 S2_NUM_ID5_ORIG = 1055 S2_NUM_ID3_ORIG = 1058 S2_NAME2_ID5 = 1056 S2_NAME2_ID3 = 1057 S2_NUM2_ID5_ORIG = 1056 S2_NUM2_ID3_ORIG = 1057 S2_SQ2 = GA S2_SQLEN2 = 2 S2_SQ = GGAU S2_SQLEN = 4 S2_CHAR = D ## Properties of strand 3 S3_NAME_ID5 = 1085 S3_NAME_ID3 = 1091 S3_NUM_ID5_ORIG = 1085 S3_NUM_ID3_ORIG = 1091 S3_NAME2_ID5 = 1086 S3_NAME2_ID3 = 1090 S3_NUM2_ID5_ORIG = 1086 S3_NUM2_ID3_ORIG = 1090 S3_SQ2 = AGAGU S3_SQLEN2 = 5 S3_SQ = AAGAGUG S3_SQLEN = 7 S3_CHAR = D ## Properties of strand 4 S4_NAME_ID5 = 1100 S4_NAME_ID3 = 1104 S4_NUM_ID5_ORIG = 1100 S4_NUM_ID3_ORIG = 1104 S4_NAME2_ID5 = 1101 S4_NAME2_ID3 = 1103 S4_NUM2_ID5_ORIG = 1101 S4_NUM2_ID3_ORIG = 1103 S4_SQ2 = UCA S4_SQLEN2 = 3 S4_SQ = CUCAC S4_SQLEN = 5 S4_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 1081 H1_OUTID2_ORIG = 1057 H1_INSEQ_CHAR = D H1_OUTSEQ_CHAR = D # Position: H1_P_X = -2.2099778327175343 H1_P_Y = -8.808114487785641 H1_P_Z = -52.238239094846726 # Orientation: H1_DX_X = -0.8805157114188762 H1_DX_Y = 0.47379319807533626 H1_DX_Z = 0.014563220868232918 H1_DY_X = -0.4730647882553103 H1_DY_Y = -0.8763858087790766 H1_DY_Z = -0.09031954541296017 H1_DZ_X = -0.030029786170887363 H1_DZ_Y = -0.08641712578066674 H1_DZ_Z = 0.9958063528188319 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1086 H2_OUTID2_ORIG = 1082 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = D # Position: H2_P_X = -4.5605929521586095 H2_P_Y = -9.21511973569168 H2_P_Z = -68.14962964671943 # Orientation: H2_DX_X = -0.6309310448154566 H2_DX_Y = 0.591919651752228 H2_DX_Z = 0.5015547253865691 H2_DY_X = 0.7104535548196358 H2_DY_Y = 0.7005527842543238 H2_DY_Z = 0.06694432700132324 H2_DZ_X = -0.31173989660006285 H2_DZ_Y = 0.3985685917668853 H2_DZ_Z = -0.8625319208729252 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 2 H3_OUTID2 = 6 H3_INID2_ORIG = 1101 H3_OUTID2_ORIG = 1090 H3_INSEQ_CHAR = D H3_OUTSEQ_CHAR = D # Position: H3_P_X = 4.394820437012947 H3_P_Y = -0.5546035071954103 H3_P_Z = -43.72229649995302 # Orientation: H3_DX_X = 0.9773939085401357 H3_DX_Y = -0.01605755781814633 H3_DX_Z = -0.21081580203000527 H3_DY_X = 0.0571100803026896 H3_DY_Y = 0.9800976668858438 H3_DY_Z = 0.19012364948302718 H3_DZ_X = 0.20356715421810723 H3_DZ_Y = -0.19786540425714094 H3_DZ_Z = 0.9588585378050851 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 1056 H4_OUTID2_ORIG = 1103 H4_INSEQ_CHAR = D H4_OUTSEQ_CHAR = D # Position: H4_P_X = 6.108207090922965 H4_P_Y = 6.975891122692222 H4_P_Z = -59.120161655742905 # Orientation: H4_DX_X = 0.056869249219684725 H4_DX_Y = -0.9756525447421387 H4_DX_Z = -0.21182067989546738 H4_DY_X = -0.9307058224109568 H4_DY_Y = 0.024976080005257195 H4_DY_Z = -0.36491487713974635 H4_DZ_X = 0.361320578743495 H4_DZ_Y = 0.21789517517779178 H4_DZ_Z = -0.906625133123228 ############# END of Description of junction: j3