#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 153
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  35
S2_NAME_ID3 = 42
S2_NUM_ID5_ORIG =  35
S2_NUM_ID3_ORIG = 42
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 40
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 40
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 40
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = -16.916675625570427
H1_P_Y = 13.917538382502851
H1_P_Z = 16.935385959363707
# Orientation:
H1_DX_X = 0.6819905837144695
H1_DX_Y = 0.6238501483787058
H1_DX_Z = -0.38170647897653254
H1_DY_X = -0.23123346322029192
H1_DY_Y = -0.31121287885542515
H1_DY_Z = -0.9217795992110425
H1_DZ_X = -0.6938443119403246
H1_DZ_Y = 0.7169083179893967
H1_DZ_Z = -0.06798922256997031
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 37
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -0.46739904306338076
H2_P_Y = 0.15161014668636597
H2_P_Z = 13.100141583859287
# Orientation:
H2_DX_X = 0.2812603316529955
H2_DX_Y = -0.19530802639824962
H2_DX_Z = 0.939546380261703
H2_DY_X = -0.5541674574211988
H2_DY_Y = -0.8323746235583098
H2_DY_Z = -0.007135488174313309
H2_DZ_X = 0.7834481826986197
H2_DZ_Y = -0.5186590989085055
H2_DZ_Z = -0.34234731508461813
#############  END of Description of junction: j1