#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 10:51:51:80:93:99:100:108:133:142
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.85218071200026
H1_P_Y = 84.49017922004387
H1_P_Z = 25.539501873775333
# Orientation:
H1_DX_X = -0.05784623307354764
H1_DX_Y = -0.39940061658671766
H1_DX_Z = 0.9149497039670322
H1_DY_X = -0.9037704330404495
H1_DY_Y = 0.4102749551185241
H1_DY_Z = 0.12195681844147188
H1_DZ_X = -0.4240905772132635
H1_DZ_Y = -0.8198497476200401
H1_DZ_Z = -0.3846993288872156
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 155.1593806291675
H2_P_Y = 97.54217823981617
H2_P_Z = 48.04980120883052
# Orientation:
H2_DX_X = -0.7308051414640602
H2_DX_Y = 0.3008845639824642
H2_DX_Z = -0.6126926834610842
H2_DY_X = -0.3141441427426628
H2_DY_Y = 0.6486379800115287
H2_DY_Z = 0.6932403828882556
H2_DZ_X = 0.6060010749084199
H2_DZ_Y = 0.6990974538958312
H2_DZ_Z = -0.379506847324528
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 137.16693508479577
H3_P_Y = 85.55150468690302
H3_P_Z = 47.34482982893962
# Orientation:
H3_DX_X = 0.8000514484339476
H3_DX_Y = -0.37965678924985014
H3_DX_Z = -0.46451953913178556
H3_DY_X = 0.2768688592859121
H3_DY_Y = -0.45324380257791574
H3_DY_Z = 0.8472978757098559
H3_DZ_X = -0.5322229933180438
H3_DZ_Y = -0.8064928876321318
H3_DZ_Z = -0.25750321858642167
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.7261606102056
H4_P_Y = 96.2333387754841
H4_P_Z = 28.00907303717376
# Orientation:
H4_DX_X = -0.2701450051829397
H4_DX_Y = -0.8569151737637242
H4_DX_Z = -0.4389966527756073
H4_DY_X = -0.2711215337414785
H4_DY_Y = 0.5052019326036259
H4_DY_Z = -0.8193070982453605
H4_DZ_X = 0.923858641847545
H4_DZ_Y = -0.10231027449401608
H4_DZ_Z = -0.3688059348987984
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.00530169901768
H5_P_Y = 82.38553185984688
H5_P_Z = 19.78154783790039
# Orientation:
H5_DX_X = -0.14944582241045623
H5_DX_Y = 0.8375730182786469
H5_DX_Z = 0.5254877593395122
H5_DY_X = 0.9849274491348581
H5_DY_Y = 0.1729092031870607
H5_DY_Z = 0.004508591126949568
H5_DZ_X = -0.08708539547356509
H5_DZ_Y = 0.5182411084667393
H5_DZ_Z = -0.8507892144299802
#############  END of Description of junction: j9