#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 148
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1424
S1_NAME_ID3 = 1430
S1_NUM_ID5_ORIG =  1424
S1_NUM_ID3_ORIG = 1430
S1_NAME2_ID5 =  1425
S1_NAME2_ID3 = 1429
S1_NUM2_ID5_ORIG =  1425
S1_NUM2_ID3_ORIG = 1429
S1_SQ2 = GCACU
S1_SQLEN2 = 5
S1_SQ = AGCACUG
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1436
S2_NAME_ID3 = 1440
S2_NUM_ID5_ORIG =  1436
S2_NUM_ID3_ORIG = 1440
S2_NAME2_ID5 =  1437
S2_NAME2_ID3 = 1439
S2_NUM2_ID5_ORIG =  1437
S2_NUM2_ID3_ORIG = 1439
S2_SQ2 = AGC
S2_SQLEN2 = 3
S2_SQ = CAGCU
S2_SQLEN = 5
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 1425
H1_OUTID2_ORIG = 1439
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 56.75844207547575
H1_P_Y = 173.27567328472153
H1_P_Z = 64.5176127867025
# Orientation:
H1_DX_X = -0.5395289013787377
H1_DX_Y = -0.8411068062133324
H1_DX_Z = -0.038051348447822875
H1_DY_X = -0.7225857854390227
H1_DY_Y = 0.4857543827922939
H1_DY_Z = -0.49184597414186726
H1_DZ_X = 0.43217860573901845
H1_DZ_Y = -0.23786975457113613
H1_DZ_Z = -0.8698503506935822
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 2
H2_OUTID2 = 6
H2_INID2_ORIG = 1437
H2_OUTID2_ORIG = 1429
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 48.48713809196652
H2_P_Y = 168.6604568414236
H2_P_Z = 76.86883406658185
# Orientation:
H2_DX_X = 0.8107743039431554
H2_DX_Y = -0.5846413629994345
H2_DX_Z = -0.02897420811102336
H2_DY_X = 0.5774678490745657
H2_DY_Y = 0.7907639460053133
H2_DY_Z = 0.20303513238674498
H2_DZ_X = -0.09579097739710818
H2_DZ_Y = -0.18134734177337464
H2_DZ_Z = 0.9787426782771007
#############  END of Description of junction: j41