############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS5HS6 FINGERPRINT = 41:138:143 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 864 S1_NAME_ID3 = 872 S1_NUM_ID5_ORIG = 864 S1_NUM_ID3_ORIG = 872 S1_NAME2_ID5 = 866 S1_NAME2_ID3 = 870 S1_NUM2_ID5_ORIG = 866 S1_NUM2_ID3_ORIG = 870 S1_SQ2 = UAGGG S1_SQLEN2 = 5 S1_SQ = UGUAGGGGU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 772 S2_NAME_ID3 = 782 S2_NUM_ID5_ORIG = 772 S2_NUM_ID3_ORIG = 782 S2_NAME2_ID5 = 774 S2_NAME2_ID3 = 780 S2_NUM2_ID5_ORIG = 774 S2_NUM2_ID3_ORIG = 780 S2_SQ2 = CGAUCUA S2_SQLEN2 = 7 S2_SQ = GACGAUCUACG S2_SQLEN = 11 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 878 S3_NAME_ID3 = 889 S3_NUM_ID5_ORIG = 878 S3_NUM_ID3_ORIG = 889 S3_NAME2_ID5 = 880 S3_NAME2_ID3 = 887 S3_NUM2_ID5_ORIG = 880 S3_NUM2_ID3_ORIG = 887 S3_SQ2 = CCAUCGAG S3_SQLEN2 = 8 S3_SQ = GCCCAUCGAGUC S3_SQLEN = 12 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 866 H1_OUTID2_ORIG = 780 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 91.92175288970923 H1_P_Y = 147.8771260693466 H1_P_Z = 66.99631370854644 # Orientation: H1_DX_X = 0.704928711670064 H1_DX_Y = -0.7044123542822547 H1_DX_Z = -0.08293820951605824 H1_DY_X = 0.16577174971551756 H1_DY_Y = 0.27731964471661286 H1_DY_Z = -0.9463686077055229 H1_DZ_X = 0.6896341337690899 H1_DZ_Y = 0.6533735912850887 H1_DZ_Z = 0.31226224836149186 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 880 H2_OUTID2_ORIG = 870 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 91.96296183140328 H2_P_Y = 128.15949195841173 H2_P_Z = 72.97817862729063 # Orientation: H2_DX_X = 0.11604510163154202 H2_DX_Y = 0.8194209625221447 H2_DX_Z = -0.5613223855919216 H2_DY_X = -0.2030846557432966 H2_DY_Y = 0.5727760359035585 H2_DY_Z = 0.7941563040713362 H2_DZ_X = 0.972260333958431 H2_DZ_Y = 0.021838014421661 H2_DZ_Z = 0.23287967738117743 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 774 H3_OUTID2_ORIG = 887 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 72.776268123867 H3_P_Y = 125.90704009822441 H3_P_Z = 62.18280498482797 # Orientation: H3_DX_X = -0.3551851383466129 H3_DX_Y = 0.93454356338286 H3_DX_Z = 0.021722008133437498 H3_DY_X = -0.28794327203722503 H3_DY_Y = -0.08727009047336765 H3_DY_Z = -0.9536627304226855 H3_DZ_X = -0.8893436847395861 H3_DZ_Y = -0.3449815349383556 H3_DZ_Z = 0.300092570660091 ############# END of Description of junction: j13