############# Start of Description of junction: j62 # Number of strands: NUM_STRANDS = 6 LILLEY = HS2HS2HS2HS10HS10HS3 FINGERPRINT = 4:31:34:36:38:62:108:138:141:145:149:153:154:171:175 LOOP_LENGTH_SUM = 29 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2275 S1_NAME_ID3 = 2281 S1_NUM_ID5_ORIG = 2275 S1_NUM_ID3_ORIG = 2281 S1_NAME2_ID5 = 2276 S1_NAME2_ID3 = 2280 S1_NUM2_ID5_ORIG = 2276 S1_NUM2_ID3_ORIG = 2280 S1_SQ2 = UUUGA S1_SQLEN2 = 5 S1_SQ = GUUUGAC S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2114 S2_NAME_ID3 = 2119 S2_NUM_ID5_ORIG = 2114 S2_NUM_ID3_ORIG = 2119 S2_NAME2_ID5 = 2115 S2_NAME2_ID3 = 2118 S2_NUM2_ID5_ORIG = 2115 S2_NUM2_ID3_ORIG = 2118 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2289 S3_NAME_ID3 = 2294 S3_NUM_ID5_ORIG = 2289 S3_NUM_ID3_ORIG = 2294 S3_NAME2_ID5 = 2290 S3_NAME2_ID3 = 2293 S3_NUM2_ID5_ORIG = 2290 S3_NUM2_ID3_ORIG = 2293 S3_SQ2 = UACG S3_SQLEN2 = 4 S3_SQ = GUACGC S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2314 S4_NAME_ID3 = 2319 S4_NUM_ID5_ORIG = 2314 S4_NUM_ID3_ORIG = 2319 S4_NAME2_ID5 = 2315 S4_NAME2_ID3 = 2318 S4_NUM2_ID5_ORIG = 2315 S4_NUM2_ID3_ORIG = 2318 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2420 S5_NAME_ID3 = 2433 S5_NUM_ID5_ORIG = 2420 S5_NUM_ID3_ORIG = 2433 S5_NAME2_ID5 = 2421 S5_NAME2_ID3 = 2432 S5_NUM2_ID5_ORIG = 2421 S5_NUM2_ID3_ORIG = 2432 S5_SQ2 = GUCUAGCGAACC S5_SQLEN2 = 12 S5_SQ = GGUCUAGCGAACCA S5_SQLEN = 14 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 2458 S6_NAME_ID3 = 2471 S6_NUM_ID5_ORIG = 2458 S6_NUM_ID3_ORIG = 2471 S6_NAME2_ID5 = 2459 S6_NAME2_ID3 = 2470 S6_NUM2_ID5_ORIG = 2459 S6_NUM2_ID3_ORIG = 2470 S6_SQ2 = GAUGACAGAAAA S6_SQLEN2 = 12 S6_SQ = UGAUGACAGAAAAG S6_SQLEN = 14 S6_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2276 H1_OUTID2_ORIG = 2118 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 90.25915301997688 H1_P_Y = 107.8351418966906 H1_P_Z = 69.21982800833571 # Orientation: H1_DX_X = -0.2027412444416683 H1_DX_Y = -0.976027224351327 H1_DX_Z = 0.0791634077544785 H1_DY_X = -0.6517899726858616 H1_DY_Y = 0.07417318455746624 H1_DY_Z = -0.7547636518796992 H1_DZ_X = 0.7307980701318257 H1_DZ_Y = -0.2046196374194409 H1_DZ_Z = -0.6512027216419796 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 2290 H2_OUTID2_ORIG = 2280 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 76.86057681617005 H2_P_Y = 97.68154329034606 H2_P_Z = 90.16204013097486 # Orientation: H2_DX_X = -0.8688182737103176 H2_DX_Y = -0.42085763664506715 H2_DX_Z = -0.2608326224699766 H2_DY_X = 0.0595859302696482 H2_DY_Y = -0.6118389854413806 H2_DY_Z = 0.7887347924416446 H2_DZ_X = -0.4915326277887715 H2_DZ_Y = 0.6697252463298611 H2_DZ_Z = 0.5566540849104342 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 2315 H3_OUTID2_ORIG = 2293 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 72.11529877444465 H3_P_Y = 77.73776931114581 H3_P_Z = 93.01974185646509 # Orientation: H3_DX_X = -0.20586472283736157 H3_DX_Y = -0.3265924875779973 H3_DX_Z = -0.9224733399663734 H3_DY_X = 0.29955515476902406 H3_DY_Y = -0.9184442382158977 H3_DY_Z = 0.25831548644892166 H3_DZ_X = -0.9316042212991533 H3_DZ_Y = -0.22315359810153268 H3_DZ_Z = 0.2869077317047015 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2421 H4_OUTID2_ORIG = 2318 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 83.08621255097576 H4_P_Y = 61.74669619335893 H4_P_Z = 75.73490503251911 # Orientation: H4_DX_X = 0.5681340709339509 H4_DX_Y = -0.3935165349053591 H4_DX_Z = 0.7227505892077062 H4_DY_X = -0.45546079608945433 H4_DY_Y = -0.8818413560418108 H4_DY_Z = -0.12211177666341655 H4_DZ_X = 0.6854043628906794 H4_DZ_Y = -0.25980869794989303 H4_DZ_Z = -0.680235473788315 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 2 H5_OUTID2 = 13 H5_INID2_ORIG = 2459 H5_OUTID2_ORIG = 2432 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 78.2463638579993 H5_P_Y = 73.01500972945959 H5_P_Z = 57.446874112340836 # Orientation: H5_DX_X = 0.7750774031689076 H5_DX_Y = 0.6043656665760153 H5_DX_Z = -0.18438318839055512 H5_DY_X = 0.6041275420868146 H5_DY_Y = -0.6232879070256274 H5_DY_Z = 0.4965300573457512 H5_DZ_X = 0.18516190750013095 H5_DZ_Y = -0.49624018984737006 H5_DZ_Z = -0.8482103170742263 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 14 H6_INID2 = 2 H6_OUTID2 = 13 H6_INID2_ORIG = 2115 H6_OUTID2_ORIG = 2470 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 81.19346701920166 H6_P_Y = 109.49962339117695 H6_P_Z = 75.88630472015008 # Orientation: H6_DX_X = 0.5186032559616933 H6_DX_Y = -0.4952656062634446 H6_DX_Z = 0.6969667439400808 H6_DY_X = 0.4033564569545547 H6_DY_Y = 0.8604585449191688 H6_DY_Z = 0.31131119656808437 H6_DZ_X = -0.7538927188526259 H6_DZ_Y = 0.11967903629327736 H6_DZ_Z = 0.646005183209013 ############# END of Description of junction: j62