############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS8HS3HS3HS6HS2 FINGERPRINT = 17:35:52:56:65:71:82:105:116:119:122:124:159:163:172 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 155 S1_NAME_ID3 = 160 S1_NUM_ID5_ORIG = 155 S1_NUM_ID3_ORIG = 160 S1_NAME2_ID5 = 156 S1_NAME2_ID3 = 159 S1_NUM2_ID5_ORIG = 156 S1_NUM2_ID3_ORIG = 159 S1_SQ2 = GGAA S1_SQLEN2 = 4 S1_SQ = GGGAAC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 43 S2_NAME_ID3 = 46 S2_NUM_ID5_ORIG = 43 S2_NUM_ID3_ORIG = 46 S2_NAME2_ID5 = 44 S2_NAME2_ID3 = 45 S2_NUM2_ID5_ORIG = 44 S2_NUM2_ID3_ORIG = 45 S2_SQ2 = GC S2_SQLEN2 = 2 S2_SQ = AGCC S2_SQLEN = 4 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 191 S3_NAME_ID3 = 202 S3_NUM_ID5_ORIG = 191 S3_NUM_ID3_ORIG = 202 S3_NAME2_ID5 = 192 S3_NAME2_ID3 = 201 S3_NUM2_ID5_ORIG = 192 S3_NUM2_ID3_ORIG = 201 S3_SQ2 = GAGAAGAAAG S3_SQLEN2 = 10 S3_SQ = GGAGAAGAAAGA S3_SQLEN = 12 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 207 S4_NAME_ID3 = 213 S4_NUM_ID5_ORIG = 207 S4_NUM_ID3_ORIG = 213 S4_NAME2_ID5 = 208 S4_NAME2_ID3 = 212 S4_NUM2_ID5_ORIG = 208 S4_NUM2_ID3_ORIG = 212 S4_SQ2 = CGAUU S4_SQLEN2 = 5 S4_SQ = UCGAUUC S4_SQLEN = 7 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 238 S5_NAME_ID3 = 244 S5_NUM_ID5_ORIG = 238 S5_NUM_ID3_ORIG = 244 S5_NAME2_ID5 = 239 S5_NAME2_ID3 = 243 S5_NUM2_ID5_ORIG = 239 S5_NUM2_ID3_ORIG = 243 S5_SQ2 = AUCAG S5_SQLEN2 = 5 S5_SQ = GAUCAGC S5_SQLEN = 7 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 438 S6_NAME_ID3 = 447 S6_NUM_ID5_ORIG = 438 S6_NUM_ID3_ORIG = 447 S6_NAME2_ID5 = 439 S6_NAME2_ID3 = 446 S6_NUM2_ID5_ORIG = 439 S6_NUM2_ID3_ORIG = 446 S6_SQ2 = CUAAAUAC S6_SQLEN2 = 8 S6_SQ = GCUAAAUACU S6_SQLEN = 10 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 156 H1_OUTID2_ORIG = 45 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 6.4073514192578624 H1_P_Y = 176.69362844566376 H1_P_Z = 105.7789802845757 # Orientation: H1_DX_X = -0.6713753240132077 H1_DX_Y = -0.70996729643619 H1_DX_Z = 0.21260670802509196 H1_DY_X = 0.3472011118946874 H1_DY_Y = -0.04786350425808905 H1_DY_Z = 0.9365684560453786 H1_DZ_X = -0.6547568725910811 H1_DZ_Y = 0.7026062360606034 H1_DZ_Z = 0.27863581041120256 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 192 H2_OUTID2_ORIG = 159 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 13.40130989666742 H2_P_Y = 167.87423243265826 H2_P_Z = 101.31475468769796 # Orientation: H2_DX_X = -0.15493286971308962 H2_DX_Y = -0.6928892943495839 H2_DX_Z = -0.7042018401411667 H2_DY_X = -0.4007848755202712 H2_DY_Y = 0.6956001056091452 H2_DY_Z = -0.5962482508408158 H2_DZ_X = 0.9029769041546221 H2_DZ_Y = 0.18985499427793684 H2_DZ_Z = -0.38547087011997405 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 2 H3_OUTID2 = 11 H3_INID2_ORIG = 208 H3_OUTID2_ORIG = 201 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 22.087776840176552 H3_P_Y = 181.32956340284218 H3_P_Z = 62.175041552951114 # Orientation: H3_DX_X = -0.0412130770064465 H3_DX_Y = -0.6615620687126977 H3_DX_Z = 0.7487570443904019 H3_DY_X = -0.49961014542443394 H3_DY_Y = -0.6353338312225105 H3_DY_Z = -0.5888468608161972 H3_DZ_X = 0.8652694290639396 H3_DZ_Y = -0.3983548068552807 H3_DZ_Z = -0.30433905924586924 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 2 H4_OUTID2 = 6 H4_INID2_ORIG = 239 H4_OUTID2_ORIG = 212 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 11.624323985233433 H4_P_Y = 166.80737466511906 H4_P_Z = 70.6212422850579 # Orientation: H4_DX_X = 0.004561250965881669 H4_DX_Y = -0.28050447412269364 H4_DX_Z = 0.9598418802004716 H4_DY_X = -0.6739130751667819 H4_DY_Y = -0.7100048931323499 H4_DY_Z = -0.2042895465935004 H4_DZ_X = 0.7387965634116593 H4_DZ_Y = -0.6459181772680438 H4_DZ_Z = -0.19227414325865766 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 7 H5_INID2 = 2 H5_OUTID2 = 6 H5_INID2_ORIG = 439 H5_OUTID2_ORIG = 243 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 11.777159681587664 H5_P_Y = 189.35734713664192 H5_P_Z = 78.23028156520193 # Orientation: H5_DX_X = -0.9882240829072568 H5_DX_Y = 0.06703131751058322 H5_DX_Z = 0.1375498616317401 H5_DY_X = 0.15166000479101704 H5_DY_Y = 0.3097799200064344 H5_DY_Z = 0.9386349898163928 H5_DZ_X = 0.020307754895771524 H5_DZ_Y = 0.9484425146700346 H5_DZ_Z = -0.3162979472862304 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 10 H6_INID2 = 2 H6_OUTID2 = 9 H6_INID2_ORIG = 44 H6_OUTID2_ORIG = 446 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = -1.0938148702887442 H6_P_Y = 157.2764996975433 H6_P_Z = 90.12011074931105 # Orientation: H6_DX_X = 0.6696628434617408 H6_DX_Y = -0.07964592532471215 H6_DX_Z = 0.7383821521853804 H6_DY_X = -0.7036279943744623 H6_DY_Y = 0.2500574339262869 H6_DY_Z = 0.6651157232172267 H6_DZ_X = -0.2376117034560945 H6_DZ_Y = -0.9649496392648587 H6_DZ_Z = 0.11141306953550156 ############# END of Description of junction: j5