############# Start of Description of junction: j24 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS5HS2HS4HS2 FINGERPRINT = 59:63:83:85:105:110:111:120:157:164 LOOP_LENGTH_SUM = 13 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 680 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 680 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACU S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 599 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 599 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1211 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1211 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1210 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1210 S4_SQ2 = GC S4_SQLEN2 = 2 S4_SQ = AGCG S4_SQLEN = 4 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1262 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1262 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1263 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1263 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = GCGGAUG S5_SQLEN2 = 7 S5_SQ = UGCGGAUGC S5_SQLEN = 9 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 20.140660098851896 H1_P_Y = 138.06249975091978 H1_P_Z = 76.67379446595412 # Orientation: H1_DX_X = -0.750279027074189 H1_DX_Y = 0.5120613734561346 H1_DX_Z = 0.41818002265392806 H1_DY_X = 0.5601989036557278 H1_DY_Y = 0.8283072653456429 H1_DY_Z = -0.009179461776696485 H1_DZ_X = -0.3510819987916314 H1_DZ_Y = 0.2273768325705703 H1_DZ_Z = -0.9083177891765928 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 32.648676066203166 H2_P_Y = 130.94702648644017 H2_P_Z = 92.84322868192122 # Orientation: H2_DX_X = -0.9985100223800032 H2_DX_Y = 0.03500965684142443 H2_DX_Z = 0.041857605456172564 H2_DY_X = 0.014450653125919644 H2_DY_Y = -0.5700333080968392 H2_DY_Z = 0.821494495589846 H2_DZ_X = 0.05262046969491507 H2_DZ_Y = 0.8208753569136036 H2_DZ_Z = 0.5686780588180369 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 17.876765807407576 H3_P_Y = 115.86609451348761 H3_P_Z = 78.68999648595246 # Orientation: H3_DX_X = -0.4155024450744307 H3_DX_Y = -0.6123361035521526 H3_DX_Z = 0.6726085149800838 H3_DY_X = -0.45229033606133484 H3_DY_Y = -0.5024771195371045 H3_DY_Z = -0.7368515428817517 H3_DZ_X = 0.789171191847938 H3_DZ_Y = -0.6103779490022987 H3_DZ_Z = -0.06817323029646616 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 1263 H4_OUTID2_ORIG = 1210 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 4.767004087094453 H4_P_Y = 121.07516014013751 H4_P_Z = 81.10521403990526 # Orientation: H4_DX_X = -0.3174312432212183 H4_DX_Y = -0.7467774577382897 H4_DX_Z = 0.5844320614416745 H4_DY_X = 0.07462074258414386 H4_DY_Y = 0.5947245532401979 H4_DY_Z = 0.8004588999751547 H4_DZ_X = -0.9453407589875846 H4_DZ_Y = 0.29770141818136153 H4_DZ_Z = -0.133059065867684 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 9 H5_INID2 = 2 H5_OUTID2 = 8 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 18.76570278104637 H5_P_Y = 119.8669618569886 H5_P_Z = 107.78109744538813 # Orientation: H5_DX_X = 0.22283445569534166 H5_DX_Y = 0.9688618160204072 H5_DX_Z = 0.10794251624177775 H5_DY_X = -0.9700803366112218 H5_DY_Y = 0.2094322542995144 H5_DY_Z = 0.12280989935378273 H5_DZ_X = 0.09637917760191428 H5_DZ_Y = -0.13207918956699416 H5_DZ_Z = 0.9865425190067043 ############# END of Description of junction: j24