############# Start of Description of junction: j89 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS2HS6HS9HS2HS2 FINGERPRINT = 6:29:35:60:63:64:94:107:113:140:145:150:155:168:174 LOOP_LENGTH_SUM = 21 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2221 S1_NAME_ID3 = 2226 S1_NUM_ID5_ORIG = 2221 S1_NUM_ID3_ORIG = 2226 S1_NAME2_ID5 = 2222 S1_NAME2_ID3 = 2225 S1_NUM2_ID5_ORIG = 2222 S1_NUM2_ID3_ORIG = 2225 S1_SQ2 = UUUG S1_SQLEN2 = 4 S1_SQ = GUUUGA S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2056 S2_NAME_ID3 = 2061 S2_NUM_ID5_ORIG = 2056 S2_NUM_ID3_ORIG = 2061 S2_NAME2_ID5 = 2057 S2_NAME2_ID3 = 2060 S2_NUM2_ID5_ORIG = 2057 S2_NUM2_ID3_ORIG = 2060 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2236 S3_NAME_ID3 = 2239 S3_NUM_ID5_ORIG = 2236 S3_NUM_ID3_ORIG = 2239 S3_NAME2_ID5 = 2237 S3_NAME2_ID3 = 2238 S3_NUM2_ID5_ORIG = 2237 S3_NUM2_ID3_ORIG = 2238 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = UCGC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2259 S4_NAME_ID3 = 2264 S4_NUM_ID5_ORIG = 2259 S4_NUM_ID3_ORIG = 2264 S4_NAME2_ID5 = 2260 S4_NAME2_ID3 = 2263 S4_NUM2_ID5_ORIG = 2260 S4_NUM2_ID3_ORIG = 2263 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2362 S5_NAME_ID3 = 2371 S5_NUM_ID5_ORIG = 2362 S5_NUM_ID3_ORIG = 2371 S5_NAME2_ID5 = 2363 S5_NAME2_ID3 = 2370 S5_NUM2_ID5_ORIG = 2363 S5_NUM2_ID3_ORIG = 2370 S5_SQ2 = GCUUAGUG S5_SQLEN2 = 8 S5_SQ = GGCUUAGUGA S5_SQLEN = 10 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 2403 S6_NAME_ID3 = 2415 S6_NUM_ID5_ORIG = 2403 S6_NUM_ID3_ORIG = 2415 S6_NAME2_ID5 = 2404 S6_NAME2_ID3 = 2414 S6_NUM2_ID5_ORIG = 2404 S6_NUM2_ID3_ORIG = 2414 S6_SQ2 = AACGGAUAAAA S6_SQLEN2 = 11 S6_SQ = CAACGGAUAAAAG S6_SQLEN = 13 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2222 H1_OUTID2_ORIG = 2060 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 56.49267754201737 H1_P_Y = 157.1714460888424 H1_P_Z = 100.37962100328474 # Orientation: H1_DX_X = 0.27927641242015966 H1_DX_Y = -0.15434951834430422 H1_DX_Z = -0.9477240693643978 H1_DY_X = -0.9469483031085772 H1_DY_Y = 0.11920366765883728 H1_DY_Z = -0.2984617175727493 H1_DZ_X = 0.15903960734834754 H1_DZ_Y = 0.9807990170282324 H1_DZ_Z = -0.1128702418306915 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 2237 H2_OUTID2_ORIG = 2225 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.66987059778599 H2_P_Y = 133.55882368910528 H2_P_Z = 90.5654548769407 # Orientation: H2_DX_X = -0.9206320245165642 H2_DX_Y = -0.00607699470543821 H2_DX_Z = -0.39038410004748414 H2_DY_X = 0.3046666775587994 H2_DY_Y = -0.6364696738348243 H2_DY_Z = -0.7085792615324351 H2_DZ_X = -0.2441616084068272 H2_DZ_Y = -0.7712777868083265 H2_DZ_Z = 0.5878058221524043 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2260 H3_OUTID2_ORIG = 2238 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 70.83922084164321 H3_P_Y = 127.31206702635565 H3_P_Z = 73.08363031359053 # Orientation: H3_DX_X = -0.6287931420883552 H3_DX_Y = 0.5798516171461046 H3_DX_Z = -0.5180649443416314 H3_DY_X = 0.6506044117619751 H3_DY_Y = 0.027465209930582546 H3_DY_Z = -0.7589199968635256 H3_DZ_X = -0.42583222501181694 H3_DZ_Y = -0.814259027789376 H3_DZ_Z = -0.39452395593293943 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2363 H4_OUTID2_ORIG = 2263 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 72.54106314590034 H4_P_Y = 147.91410772764368 H4_P_Z = 56.14563888106192 # Orientation: H4_DX_X = 0.9731639782636847 H4_DX_Y = -0.17634280777340905 H4_DX_Z = -0.14783465614191726 H4_DY_X = -0.18113500943437089 H4_DY_Y = -0.1908073880337895 H4_DY_Z = -0.9647707753808348 H4_DZ_X = 0.14192244278906685 H4_DZ_Y = 0.965658197717147 H4_DZ_Z = -0.21762873297077334 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 10 H5_INID2 = 2 H5_OUTID2 = 9 H5_INID2_ORIG = 2404 H5_OUTID2_ORIG = 2370 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 60.86499645714216 H5_P_Y = 150.89459706536127 H5_P_Z = 68.48281282204573 # Orientation: H5_DX_X = -0.5323188186419685 H5_DX_Y = -0.8142773042864349 H5_DX_Z = -0.23149329805339391 H5_DY_X = -0.20632738163517672 H5_DY_Y = -0.14041399076936045 H5_DY_Z = 0.9683557831622664 H5_DZ_X = -0.8210150345195828 H5_DZ_Y = 0.5632374125715103 H5_DZ_Z = -0.09326269443123181 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 13 H6_INID2 = 2 H6_OUTID2 = 12 H6_INID2_ORIG = 2057 H6_OUTID2_ORIG = 2414 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 53.36891254370002 H6_P_Y = 146.10016987653518 H6_P_Z = 99.99815346175612 # Orientation: H6_DX_X = 0.9735728762584657 H6_DX_Y = -0.19509081211188573 H6_DX_Z = -0.11872417463742124 H6_DY_X = 0.11998549248787072 H6_DY_Y = -0.00538270138633834 H6_DY_Z = 0.9927610528814199 H6_DZ_X = -0.19431761681911297 H6_DZ_Y = -0.9807704122552252 H6_DZ_Z = 0.01816761510035292 ############# END of Description of junction: j89