############# Start of Description of junction: j86 # Number of strands: NUM_STRANDS = 5 LILLEY = HS4HS8HS6HS9HS6 FINGERPRINT = 9:22:58:61:90:112:148:149:167:170 LOOP_LENGTH_SUM = 33 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2424 S1_NAME_ID3 = 2433 S1_NUM_ID5_ORIG = 2424 S1_NUM_ID3_ORIG = 2433 S1_NAME2_ID5 = 2425 S1_NAME2_ID3 = 2432 S1_NUM2_ID5_ORIG = 2425 S1_NUM2_ID3_ORIG = 2432 S1_SQ2 = GGAUAACA S1_SQLEN2 = 8 S1_SQ = GGGAUAACAG S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2036 S2_NAME_ID3 = 2048 S2_NUM_ID5_ORIG = 2036 S2_NUM_ID3_ORIG = 2048 S2_NAME2_ID5 = 2037 S2_NAME2_ID3 = 2047 S2_NUM2_ID5_ORIG = 2037 S2_NUM2_ID3_ORIG = 2047 S2_SQ2 = ACGAAAAGACC S2_SQLEN2 = 11 S2_SQ = GACGAAAAGACCC S2_SQLEN = 13 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2477 S3_NAME_ID3 = 2486 S3_NUM_ID5_ORIG = 2477 S3_NUM_ID3_ORIG = 2486 S3_NAME2_ID5 = 2478 S3_NAME2_ID3 = 2485 S3_NUM2_ID5_ORIG = 2478 S3_NUM2_ID3_ORIG = 2485 S3_SQ2 = CUCGAUGU S3_SQLEN2 = 8 S3_SQ = CCUCGAUGUC S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2561 S4_NAME_ID3 = 2568 S4_NUM_ID5_ORIG = 2561 S4_NUM_ID3_ORIG = 2568 S4_NAME2_ID5 = 2562 S4_NAME2_ID3 = 2567 S4_NUM2_ID5_ORIG = 2562 S4_NUM2_ID3_ORIG = 2567 S4_SQ2 = GUUCAG S4_SQLEN2 = 6 S4_SQ = GGUUCAGA S4_SQLEN = 8 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2584 S5_NAME_ID3 = 2595 S5_NUM_ID5_ORIG = 2584 S5_NUM_ID3_ORIG = 2595 S5_NAME2_ID5 = 2585 S5_NAME2_ID3 = 2594 S5_NUM2_ID5_ORIG = 2585 S5_NUM2_ID3_ORIG = 2594 S5_SQ2 = CGGUCUCUAU S5_SQLEN2 = 10 S5_SQ = UCGGUCUCUAUC S5_SQLEN = 12 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 2425 H1_OUTID2_ORIG = 2047 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 48.67497949487499 H1_P_Y = 131.73534229531407 H1_P_Z = 103.28534345122841 # Orientation: H1_DX_X = 0.7216796693978367 H1_DX_Y = -0.43384238066275316 H1_DX_Z = -0.5394063806803757 H1_DY_X = -0.6658809650767452 H1_DY_Y = -0.2221526593073122 H1_DY_Z = -0.7122153721390418 H1_DZ_X = 0.1891586506779248 H1_DZ_Y = 0.8731717956413547 H1_DZ_Z = -0.4492104408516582 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 2 H2_OUTID2 = 9 H2_INID2_ORIG = 2478 H2_OUTID2_ORIG = 2432 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 59.213636136567885 H2_P_Y = 110.88301980869464 H2_P_Z = 99.67390857276229 # Orientation: H2_DX_X = -0.3572018259562455 H2_DX_Y = -0.5886149760861059 H2_DX_Z = 0.7252167024143148 H2_DY_X = -0.6542072996707233 H2_DY_Y = -0.39650582106683885 H2_DY_Z = -0.6440465378508407 H2_DZ_X = 0.6666480815175859 H2_DZ_Y = -0.7044966598836879 H2_DZ_Z = -0.24344361076367704 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2562 H3_OUTID2_ORIG = 2485 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 56.20785848447706 H3_P_Y = 117.90290252124319 H3_P_Z = 125.82317811756683 # Orientation: H3_DX_X = 0.5431406198927817 H3_DX_Y = -0.3544378563893531 H3_DX_Z = -0.7611649446608766 H3_DY_X = 0.8392100711344455 H3_DY_Y = 0.20009255909185697 H3_DY_Z = 0.5056574179250077 H3_DZ_X = -0.026920689608523674 H3_DZ_Y = -0.9134203707790789 H3_DZ_Z = 0.40612621525434633 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 2585 H4_OUTID2_ORIG = 2567 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 65.70117183040185 H4_P_Y = 136.42137481227016 H4_P_Z = 119.19274012165052 # Orientation: H4_DX_X = -0.29503003720597576 H4_DX_Y = 0.7377610051765657 H4_DX_Z = 0.6071787021850099 H4_DY_X = 0.8232730583321484 H4_DY_Y = -0.12624658646731746 H4_DY_Z = 0.5534286501707015 H4_DZ_X = 0.48495231576997355 H4_DZ_Y = 0.6631519423527266 H4_DZ_Z = -0.5701322239473541 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 2037 H5_OUTID2_ORIG = 2594 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 39.850590187253275 H5_P_Y = 103.3857511049355 H5_P_Z = 125.34883089752614 # Orientation: H5_DX_X = -0.8614102550369864 H5_DX_Y = -0.29016215913208043 H5_DX_Z = -0.41686723776872725 H5_DY_X = 0.5073191107695294 H5_DY_Y = -0.45196789249455094 H5_DY_Z = -0.7337249784503967 H5_DZ_X = 0.024488617051957817 H5_DZ_Y = -0.8435229371877426 H5_DZ_Z = 0.5365345860921167 ############# END of Description of junction: j86