#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 148
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  21
S1_NAME_ID3 = 29
S1_NUM_ID5_ORIG =  21
S1_NUM_ID3_ORIG = 29
S1_NAME2_ID5 =  23
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  23
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CGAGC
S1_SQLEN2 = 5
S1_SQ = ACCGAGCCA
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  41
S2_NAME_ID3 = 47
S2_NUM_ID5_ORIG =  41
S2_NUM_ID3_ORIG = 47
S2_NAME2_ID5 =  43
S2_NAME2_ID3 = 45
S2_NUM2_ID5_ORIG =  43
S2_NUM2_ID3_ORIG = 45
S2_SQ2 = GGA
S2_SQLEN2 = 3
S2_SQ = UGGGAGU
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 23
H1_OUTID2_ORIG = 45
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 9.02147572521518
H1_P_Y = 49.262588590994326
H1_P_Z = 22.426788443637033
# Orientation:
H1_DX_X = 0.25829346241927276
H1_DX_Y = -0.7813981620016008
H1_DX_Z = -0.568068129445745
H1_DY_X = -0.9656732391699521
H1_DY_Y = -0.1920578158063151
H1_DY_Z = -0.17489708556380634
H1_DZ_X = 0.027562337028463446
H1_DZ_Y = 0.5937429644284009
H1_DZ_Z = -0.8041825724108307
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 18.576173312503695
H2_P_Y = 35.37385999514716
H2_P_Z = 38.417467017116834
# Orientation:
H2_DX_X = 0.29321974333263157
H2_DX_Y = 0.9201234196596388
H2_DX_Z = 0.2596056137948466
H2_DY_X = -0.8242276574269916
H2_DY_Y = 0.10570302756049443
H2_DY_Z = 0.556305346637032
H2_DZ_X = 0.4844284785727915
H2_DZ_Y = -0.37709383786850736
H2_DZ_Z = 0.7893853853405517
#############  END of Description of junction: j1