#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 142
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  18
S1_NAME_ID3 = 24
S1_NUM_ID5_ORIG =  18
S1_NUM_ID3_ORIG = 24
S1_NAME2_ID5 =  19
S1_NAME2_ID3 = 23
S1_NUM2_ID5_ORIG =  19
S1_NUM2_ID3_ORIG = 23
S1_SQ2 = GAAGU
S1_SQLEN2 = 5
S1_SQ = UGAAGUC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  5
S2_NAME_ID3 = 9
S2_NUM_ID5_ORIG =  5
S2_NUM_ID3_ORIG = 9
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 8
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 8
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = UCACA
S2_SQLEN = 5
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 19
H1_OUTID2_ORIG = 8
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -1.1347573242947608
H1_P_Y = 8.51568485085448
H1_P_Z = 38.02105551418091
# Orientation:
H1_DX_X = -0.5252794674060679
H1_DX_Y = 0.0440599317478334
H1_DX_Z = 0.8497883286654258
H1_DY_X = 0.8447331351971683
H1_DY_Y = 0.14730170084471617
H1_DY_Z = 0.5145173847677214
H1_DZ_X = -0.10250566531446448
H1_DZ_Y = 0.9881097769694573
H1_DZ_Z = -0.11459344324963894
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 2
H2_OUTID2 = 6
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 23
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 1.149773767102979
H2_P_Y = -8.441658975771695
H2_P_Z = 36.77484632557038
# Orientation:
H2_DX_X = -0.9388387371609543
H2_DX_Y = -0.1412528771624224
H2_DX_Z = -0.31405326029093317
H2_DY_X = 0.19147583508839827
H2_DY_Y = 0.5438804155971733
H2_DY_Z = -0.8170257634291858
H2_DZ_X = 0.2862146575268787
H2_DZ_Y = -0.8271890462422622
H2_DZ_Z = -0.48356948993251336
#############  END of Description of junction: j1