#############  Start of Description of junction: j11
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS2HS2HS2HS2HS4
FINGERPRINT = 9:51:55:84:92:97:99:107:133:141
LOOP_LENGTH_SUM = 12
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  35
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  35
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  36
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  36
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = CUGG
S2_SQLEN2 = 4
S2_SQ = GCUGGC
S2_SQLEN = 6
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 549
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 549
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 548
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 548
S5_SQ2 = CGAG
S5_SQLEN2 = 4
S5_SQ = GCGAGC
S5_SQLEN = 6
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 63.7253118086853
H1_P_Y = 107.31033208476998
H1_P_Z = 112.88094629372273
# Orientation:
H1_DX_X = -0.15837037020182265
H1_DX_Y = 0.9602077626570349
H1_DX_Z = -0.23004320980049897
H1_DY_X = -0.5932274217075104
H1_DY_Y = 0.09371317266094081
H1_DY_Z = 0.7995617971139382
H1_DZ_X = 0.7893035233523378
H1_DZ_Y = 0.2630948380394358
H1_DZ_Z = 0.5547801854974637
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 43.058703718816574
H2_P_Y = 115.76515428497592
H2_P_Z = 95.03699343484853
# Orientation:
H2_DX_X = -0.1422776889734223
H2_DX_Y = -0.4111206499987077
H2_DX_Z = 0.9004092793641405
H2_DY_X = -0.9521145509174502
H2_DY_Y = 0.30554581864969066
H2_DY_Z = -0.010937761971760551
H2_DZ_X = -0.27061955057173037
H2_DZ_Y = -0.8588489761595639
H2_DZ_Z = -0.43490630599937674
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 48.87773286784701
H3_P_Y = 126.3382468292491
H3_P_Z = 111.80539737222608
# Orientation:
H3_DX_X = 0.721658835297724
H3_DX_Y = -0.3969848416287647
H3_DX_Z = -0.5671080681437246
H3_DY_X = 0.025620468230684423
H3_DY_Y = 0.8339812228745132
H3_DY_Z = -0.5511977063634959
H3_DZ_X = 0.6917746143393586
H3_DZ_Y = 0.3832471205498251
H3_DZ_Z = 0.6120208554827968
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 55.34451441133655
H4_P_Y = 97.84083926911138
H4_P_Z = 94.14301760827004
# Orientation:
H4_DX_X = 0.8747129282143646
H4_DX_Y = 0.23451642972364084
H4_DX_Z = 0.4241218426399769
H4_DY_X = -0.003884676872942805
H4_DY_Y = -0.8717041949494728
H4_DY_Z = 0.4900170464311344
H4_DZ_X = 0.4846258376317252
H4_DZ_Y = -0.4302718218721395
H4_DZ_Z = -0.7615799083501145
## Properties of helix 5
H5_INID = 1
H5_OUTID = 6
H5_INID2 = 2
H5_OUTID2 = 5
H5_INID2_ORIG = 36
H5_OUTID2_ORIG = 548
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 69.39784402752879
H5_P_Y = 98.89707450166742
H5_P_Z = 107.44260481753523
# Orientation:
H5_DX_X = -0.8682179894138784
H5_DX_Y = -0.18147945762507334
H5_DX_Z = -0.4618037779384423
H5_DY_X = 0.4960248511342513
H5_DY_Y = -0.3409437743807331
H5_DY_Z = -0.7985716560010587
H5_DZ_X = -0.0125247720677919
H5_DZ_Y = -0.922400427781298
H5_DZ_Z = 0.38603183924841744
#############  END of Description of junction: j11