############# Start of Description of junction: j21 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS5HS2HS4HS2 FINGERPRINT = 58:67:86:90:104:109:110:113:157:163 LOOP_LENGTH_SUM = 13 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 680 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 680 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACU S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 599 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 599 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1211 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1211 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1210 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1210 S4_SQ2 = GC S4_SQLEN2 = 2 S4_SQ = AGCG S4_SQLEN = 4 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1262 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1262 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1263 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1263 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = GCGGAUG S5_SQLEN2 = 7 S5_SQ = UGCGGAUGC S5_SQLEN = 9 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 193.74076562114453 H1_P_Y = 21.731067541035493 H1_P_Z = 69.46958230073236 # Orientation: H1_DX_X = 0.44488589959209435 H1_DX_Y = -0.4728509712836555 H1_DX_Z = 0.7605843117631679 H1_DY_X = -0.773135882825386 H1_DY_Y = -0.6314269814582687 H1_DY_Z = 0.05967305735670436 H1_DZ_X = 0.4520369929905428 H1_DZ_Y = -0.6145827251417053 H1_DZ_Z = -0.6464910138010111 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 181.450958379482 H2_P_Y = 37.73811818469303 H2_P_Z = 76.70620953901886 # Orientation: H2_DX_X = 0.8212428374976639 H2_DX_Y = -0.32106542382921077 H2_DX_Z = 0.4716748832407234 H2_DY_X = -0.055770975234196385 H2_DY_Y = 0.7775327298521546 H2_DY_Z = 0.6263644724360518 H2_DZ_X = -0.5678466343831019 H2_DZ_Y = -0.5407031048829225 H2_DZ_Z = 0.6206370535101513 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 202.70751493976314 H3_P_Y = 41.95536741682812 H3_P_Z = 65.43443812129088 # Orientation: H3_DX_X = 0.4267765472566225 H3_DX_Y = 0.7088093551270234 H3_DX_Z = 0.5616503154064247 H3_DY_X = 0.7420095396400086 H3_DY_Y = 0.08058821966029939 H3_DY_Z = -0.6655278971877863 H3_DZ_X = -0.5169947986149737 H3_DZ_Y = 0.7007815900381544 H3_DZ_Z = -0.49155014115414986 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 1263 H4_OUTID2_ORIG = 1210 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 212.55725370446382 H4_P_Y = 34.837496167067385 H4_P_Z = 73.32358271563241 # Orientation: H4_DX_X = 0.4267953493382777 H4_DX_Y = 0.8184665014274017 H4_DX_Z = 0.3846535009906944 H4_DY_X = -0.42404256554314657 H4_DY_Y = -0.19456497453249 H4_DY_Z = 0.8844955473560958 H4_DZ_X = 0.7987700747967494 H4_DZ_Y = -0.54060804352725 H4_DZ_Z = 0.26402520880178315 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 9 H5_INID2 = 2 H5_OUTID2 = 8 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 194.79127051047476 H5_P_Y = 49.537109548125734 H5_P_Z = 92.6087846571205 # Orientation: H5_DX_X = -0.5385988178854575 H5_DX_Y = -0.7841458439918156 H5_DX_Z = 0.3082638621744991 H5_DY_X = 0.8063741595659906 H5_DY_Y = -0.37365487305037703 H5_DY_Z = 0.4584132967421084 H5_DZ_X = -0.24427858718408402 H5_DZ_Y = 0.49547687251380523 H5_DZ_Z = 0.8335650188481338 ############# END of Description of junction: j21