#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS6
FINGERPRINT = 47
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  546
S1_NAME_ID3 = 557
S1_NUM_ID5_ORIG =  546
S1_NUM_ID3_ORIG = 557
S1_NAME2_ID5 =  548
S1_NAME2_ID3 = 555
S1_NUM2_ID5_ORIG =  548
S1_NUM2_ID3_ORIG = 555
S1_SQ2 = UACAAGGU
S1_SQLEN2 = 8
S1_SQ = CAUACAAGGUCC
S1_SQLEN = 12
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  600
S2_NAME_ID3 = 610
S2_NUM_ID5_ORIG =  600
S2_NUM_ID3_ORIG = 610
S2_NAME2_ID5 =  602
S2_NAME2_ID3 = 608
S2_NUM2_ID5_ORIG =  602
S2_NUM2_ID3_ORIG = 608
S2_SQ2 = AAGCCGA
S2_SQLEN2 = 7
S2_SQ = GGAAGCCGAUG
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 548
H1_OUTID2_ORIG = 608
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 10.04674722068668
H1_P_Y = 126.53660759591793
H1_P_Z = 94.30137863390448
# Orientation:
H1_DX_X = 0.5441491043134548
H1_DX_Y = 0.5438555921672048
H1_DX_Z = -0.6388449320009784
H1_DY_X = 0.0047982271195934345
H1_DY_Y = 0.7594168113096629
H1_DY_Z = 0.650586722671747
H1_DZ_X = 0.8389748084962818
H1_DZ_Y = -0.35708150549800166
H1_DZ_Z = 0.4106264350232607
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 602
H2_OUTID2_ORIG = 555
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -10.69518905978062
H2_P_Y = 116.25497994834326
H2_P_Z = 92.16515409471963
# Orientation:
H2_DX_X = 0.7092848144843948
H2_DX_Y = 0.49179591331460415
H2_DX_Z = 0.5050265652308639
H2_DY_X = -0.6770985168903678
H2_DY_Y = 0.2760137264210698
H2_DY_Z = 0.6821686164373233
H2_DZ_X = 0.19609347354434448
H2_DZ_Y = -0.82580457886489
H2_DZ_Z = 0.5287666282577845
#############  END of Description of junction: j5