############# Start of Description of junction: j42 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 18:25:28:46:110:127:132:151:156:172 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 71.65569459004129 H1_P_Y = 113.510809742141 H1_P_Z = 83.11643246120447 # Orientation: H1_DX_X = -0.37376102041227455 H1_DX_Y = -0.8882410867335011 H1_DX_Z = 0.26707765061654243 H1_DY_X = -0.6762541590284314 H1_DY_Y = 0.06389162345976729 H1_DY_Z = -0.733892480441412 H1_DZ_X = 0.6348094296851059 H1_DZ_Y = -0.45491277437565714 H1_DZ_Z = -0.6245569275035763 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.15714400425237 H2_P_Y = 108.65470071048334 H2_P_Z = 115.72701871573356 # Orientation: H2_DX_X = -0.5806234778851405 H2_DX_Y = -0.8051590480385329 H2_DX_Z = -0.12081094441420248 H2_DY_X = 0.8126543343985588 H2_DY_Y = -0.5821818288239058 H2_DY_Z = -0.02563690641405003 H2_DZ_X = -0.049692149398026686 H2_DZ_Y = -0.11306292738532875 H2_DZ_Z = 0.9923444284819993 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 64.95781432435207 H3_P_Y = 130.98966166556443 H3_P_Z = 114.24572520679635 # Orientation: H3_DX_X = 0.7480335208723545 H3_DX_Y = 0.5204395400988631 H3_DX_Z = 0.41181128779209075 H3_DY_X = -0.43583415632905087 H3_DY_Y = 0.8531857127266846 H3_DY_Z = -0.28657063313606557 H3_DZ_X = -0.500494195598975 H3_DZ_Y = 0.03488301450175868 H3_DZ_Z = 0.8650368405282052 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 91.45559062199169 H4_P_Y = 119.89970529710418 H4_P_Z = 94.57210259800263 # Orientation: H4_DX_X = 0.7111826716008522 H4_DX_Y = 0.69955164440087 H4_DX_Z = -0.0696182765566391 H4_DY_X = 0.3204133542601113 H4_DY_Y = -0.2344007848391243 H4_DY_Z = 0.917818911593443 H4_DZ_X = 0.625743150203391 H4_DZ_Y = -0.6750435311021477 H4_DZ_Z = -0.39084746524788727 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 48.50850454977391 H5_P_Y = 141.03141486493445 H5_P_Z = 107.80019220257836 # Orientation: H5_DX_X = -0.7270973814145236 H5_DX_Y = -0.6726793523993138 H5_DX_Z = -0.13722932192416692 H5_DY_X = 0.42190519094433654 H5_DY_Y = -0.5955028707928136 H5_DY_Z = 0.6836463564824413 H5_DZ_X = -0.5415952435115585 H5_DZ_Y = 0.43917971234239417 H5_DZ_Z = 0.7167954885966452 ############# END of Description of junction: j42