############# Start of Description of junction: j43 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 19:23:27:46:109:127:132:151:155:172 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 71.5883801942002 H1_P_Y = 113.49189237412223 H1_P_Z = 83.11856346038616 # Orientation: H1_DX_X = -0.3782649907252136 H1_DX_Y = -0.883778104605824 H1_DX_Z = 0.2754121613345717 H1_DY_X = -0.6801983141785257 H1_DY_Y = 0.0635574037656852 H1_DY_Z = -0.7302675604292403 H1_DZ_X = 0.6278899984713462 H1_DZ_Y = -0.4635695398167172 H1_DZ_Z = -0.6251859176067143 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.00712433860747 H2_P_Y = 108.7615762497543 H2_P_Z = 115.69930158921834 # Orientation: H2_DX_X = -0.5875317476290292 H2_DX_Y = -0.7987555216696904 H2_DX_Z = -0.1295996224152418 H2_DY_X = 0.8073527240456855 H2_DY_Y = -0.5894417460413166 H2_DY_Z = -0.02720306967570707 H2_DZ_X = -0.05466282561287983 H2_DZ_Y = -0.12061527525968074 H2_DZ_Z = 0.9911931854437057 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 64.88400787007998 H3_P_Y = 131.38872037902786 H3_P_Z = 114.41666058119033 # Orientation: H3_DX_X = 0.757440175498715 H3_DX_Y = 0.5408131938538645 H3_DX_Z = 0.36579429997482293 H3_DY_X = -0.4508152143702233 H3_DY_Y = 0.8384708774440526 H3_DY_Z = -0.3061571984626852 H3_DZ_X = -0.47228171998587243 H3_DZ_Y = 0.06699012637520241 H3_DZ_Z = 0.878898344483261 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 91.67079784978647 H4_P_Y = 120.06742307732546 H4_P_Z = 94.71143977991717 # Orientation: H4_DX_X = 0.7184910442545203 H4_DX_Y = 0.6902153476513888 H4_DX_Z = -0.08586846448210395 H4_DY_X = 0.3176851879953375 H4_DY_Y = -0.21583288870778006 H4_DY_Z = 0.9233050879749385 H4_DZ_X = 0.6187461035468544 H4_DZ_Y = -0.6906655761064968 H4_DZ_Z = -0.374345190068027 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 48.664848059264635 H5_P_Y = 141.13064710162655 H5_P_Z = 107.7451473372181 # Orientation: H5_DX_X = -0.728288315718757 H5_DX_Y = -0.672421399900827 H5_DX_Z = -0.13208175552645685 H5_DY_X = 0.428546404317693 H5_DY_Y = -0.5973119213305722 H5_DY_Z = 0.6779133041789294 H5_DZ_X = -0.534737420173613 H5_DZ_Y = 0.4371131770969896 H5_DZ_Z = 0.7231790662583251 ############# END of Description of junction: j43