############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 143 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -28.4760120693071 H1_P_Y = 89.09239878759868 H1_P_Z = 25.740992569674404 # Orientation: H1_DX_X = -0.9351628548151574 H1_DX_Y = 0.0589300844606413 H1_DX_Z = 0.3492816630162814 H1_DY_X = 0.07894448130589993 H1_DY_Y = 0.9959367691770495 H1_DY_Z = 0.04333267442143551 H1_DZ_X = -0.34530885283366786 H1_DZ_Y = 0.06809696723520631 H1_DZ_Z = -0.9360152772300587 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -27.661591105971382 H2_P_Y = 79.24684575692369 H2_P_Z = 47.20583499203264 # Orientation: H2_DX_X = 0.731056882402342 H2_DX_Y = -0.3024682510533836 H2_DX_Z = -0.6116116347788605 H2_DY_X = 0.6066454577626601 H2_DY_Y = 0.6984218706847969 H2_DY_Z = 0.3797211860366616 H2_DZ_X = 0.3123093390664131 H2_DZ_Y = -0.6486292065994803 H2_DZ_Z = 0.6940771060033839 ############# END of Description of junction: j9