############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:129:169 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 3 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 3 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 3 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 3 H1_OUTSEQ_CHAR = 3 # Position: H1_P_X = 72.23737515130617 H1_P_Y = -21.471248090141994 H1_P_Z = 25.62332079626886 # Orientation: H1_DX_X = 0.6586260174580332 H1_DX_Y = 0.46802800095456476 H1_DX_Z = 0.5892041746710959 H1_DY_X = 0.624065370321091 H1_DY_Y = -0.777245582290579 H1_DY_Z = -0.0801979948363396 H1_DZ_X = 0.4204214346264621 H1_DZ_Y = 0.4205224074080327 H1_DZ_Z = -0.8039942301872465 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 3 H2_OUTSEQ_CHAR = 3 # Position: H2_P_X = 86.08948418002355 H2_P_Y = -37.149648761055964 H2_P_Z = 35.233032335538354 # Orientation: H2_DX_X = 0.4292092765946762 H2_DX_Y = 0.5260399928158463 H2_DX_Z = 0.7342079561291754 H2_DY_X = -0.0866768277132195 H2_DY_Y = -0.7851506290945807 H2_DY_Z = 0.6132092768133504 H2_DZ_X = 0.8990364422105728 H2_DZ_Y = -0.3268339266212905 H2_DZ_Z = -0.2913984557039839 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 3 H3_OUTSEQ_CHAR = 3 # Position: H3_P_X = 65.18303480574724 H3_P_Y = -27.844523038639387 H3_P_Z = 41.606540629801046 # Orientation: H3_DX_X = -0.4358837860382465 H3_DX_Y = 0.8999606664343069 H3_DX_Z = 0.008724903442463017 H3_DY_X = -0.719494530680123 H3_DY_Y = -0.34262083286290235 H3_DY_Z = -0.6041014692994153 H3_DZ_X = -0.540678227220539 H3_DZ_Y = -0.26959555589706596 H3_DZ_Z = 0.7968596431305812 ############# END of Description of junction: j1