############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS5HS6 FINGERPRINT = 40:138:143 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 864 S1_NAME_ID3 = 872 S1_NUM_ID5_ORIG = 864 S1_NUM_ID3_ORIG = 872 S1_NAME2_ID5 = 866 S1_NAME2_ID3 = 870 S1_NUM2_ID5_ORIG = 866 S1_NUM2_ID3_ORIG = 870 S1_SQ2 = UAGGG S1_SQLEN2 = 5 S1_SQ = UGUAGGGGU S1_SQLEN = 9 S1_CHAR = 3 ## Properties of strand 2 S2_NAME_ID5 = 772 S2_NAME_ID3 = 782 S2_NUM_ID5_ORIG = 772 S2_NUM_ID3_ORIG = 782 S2_NAME2_ID5 = 774 S2_NAME2_ID3 = 780 S2_NUM2_ID5_ORIG = 774 S2_NUM2_ID3_ORIG = 780 S2_SQ2 = CGAUCUA S2_SQLEN2 = 7 S2_SQ = GACGAUCUACG S2_SQLEN = 11 S2_CHAR = 3 ## Properties of strand 3 S3_NAME_ID5 = 878 S3_NAME_ID3 = 889 S3_NUM_ID5_ORIG = 878 S3_NUM_ID3_ORIG = 889 S3_NAME2_ID5 = 880 S3_NAME2_ID3 = 887 S3_NUM2_ID5_ORIG = 880 S3_NUM2_ID3_ORIG = 887 S3_SQ2 = CCAUCGAG S3_SQLEN2 = 8 S3_SQ = GCCCAUCGAGUC S3_SQLEN = 12 S3_CHAR = 3 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 866 H1_OUTID2_ORIG = 780 H1_INSEQ_CHAR = 3 H1_OUTSEQ_CHAR = 3 # Position: H1_P_X = 36.35055270169927 H1_P_Y = 0.008041279813047808 H1_P_Z = 26.66905398196344 # Orientation: H1_DX_X = -0.885760081957784 H1_DX_Y = -0.25290133813077564 H1_DX_Z = 0.3891914572312771 H1_DY_X = 0.44546681744996164 H1_DY_Y = -0.22774062197296163 H1_DY_Z = 0.8658484415036938 H1_DZ_X = -0.13033952493831436 H1_DZ_Y = 0.9403058663408589 H1_DZ_Z = 0.31438270620983744 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 880 H2_OUTID2_ORIG = 870 H2_INSEQ_CHAR = 3 H2_OUTSEQ_CHAR = 3 # Position: H2_P_X = 20.81735693726997 H2_P_Y = -10.613920320878254 H2_P_Z = 18.942359975128 # Orientation: H2_DX_X = 0.6979162518067774 H2_DX_Y = 0.31376256965630844 H2_DX_Z = 0.643790303861941 H2_DY_X = 0.21602284783331882 H2_DY_Y = 0.7648277881225933 H2_DY_Z = -0.6069370508788268 H2_DZ_X = -0.6828228428208618 H2_DZ_Y = 0.5626646464797425 H2_DZ_Z = 0.4660058593235341 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 774 H3_OUTID2_ORIG = 887 H3_INSEQ_CHAR = 3 H3_OUTSEQ_CHAR = 3 # Position: H3_P_X = 35.73697910449047 H3_P_Y = -26.709096052890324 H3_P_Z = 13.747165349533063 # Orientation: H3_DX_X = 0.8389523009183648 H3_DX_Y = 0.5342354224612826 H3_DX_Z = -0.10368968208745599 H3_DY_X = 0.5066008527390764 H3_DY_Y = -0.6970774272966374 H3_DY_Z = 0.5073841112584567 H3_DZ_X = 0.19878282820157267 H3_DZ_Y = -0.47820034895545405 H3_DZ_Z = -0.8554588321310774 ############# END of Description of junction: j11